Phragmites australis (common reed): 133895376
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Entry
133895376 CDS
T10575
Name
(RefSeq) peroxisome biogenesis protein 5-like isoform X1
KO
K13342
peroxin-5
Organism
paua Phragmites australis (common reed)
Pathway
paua04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
133895376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133895376
Membrane trafficking [BR:
paua04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133895376
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_17
TPR_16
TPR_CcmH_CycH
TPR_14
TPR_8
TPR_19
TPR_9
TPR_7
TPR_12
CFAP70_TPR_C
RMD1-3
TPR_20
PPTA
CFAP70_mid_TPR
CABIN1_N
TPR_10
Motif
Other DBs
NCBI-GeneID:
133895376
NCBI-ProteinID:
XP_062191620
LinkDB
All DBs
Position
16:26089438..26098542
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AA seq
737 aa
AA seq
DB search
MAMRHLVTGQNNCAPDGASSSNPFGALANAVLGQSSKAQSIKELPGASVSVPSTSDFNTA
APLSTIPGSENEFKQDQRPLARGADFIRGGPANDWVESFRPPGLPEFGGAESRFAEFDQI
YNNTGTTFGPPLDGPPQRLLSGVLHSFLASGRAGVPFQPVPVPALGLSESDKQCIRDRSC
IMARHVLADQPEEYIQAQVNTLLHSLDIGNDYRMRGPMHGPYPELEEYWSQSQSAMRSAP
MHNSADKWITEFGKQNSSPEDWAYSFEQQYGPSGWASEFEQHQSQMAMGHMGGANMANLA
AMEQSRMLAQTLASNNDPKFQNSKFFQFVSKMSRGELIIEDNQVKQGSASQSSGWADEFQ
TQYNSNANSWADQFVHEELSQGADKWVSEFSSEHNQGGINKNWVDEFSKLNVTDKWAEEF
SGGGFGESSADPWVDEFQEQLVASKQSSGASRGVYVFSEMNPYVGHPNPMQEGQDLFHKG
LLSEAVLALEAEVLKNPDNAEGWRLLGITHAENDDDQQAIAAMMRAHEANPTNLEVLLSL
GVSHTNELEQGEALRYLYRWLQNHPKYGGLAPPQSTDSPYGPDVVRLFNEAAQMSPEDAD
VHIVLGVLYNLSREYDKAIASFKTALQLKPQDYSLWNKLGATQANSIQSADAILAYQQAL
DLKPNYVRAWANMGISYANQGLYEDSIRYYVRAVAMNPKADNAWQYMRISLSNASRADMI
AACDSRNLDALQKEFPL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcggcacctcgtcacgggccagaacaactgcgccccggatggcgcgtcgtcg
tccaaccccttcggcgccctcgccaacgccgtcctcggccagtcttccaaggcgcagtca
ataaaggaacttcctggcgcttctgttagtgttccatctacatctgattttaacacagct
gctcccttgtcaaccatacccggttcagagaatgagttcaaacaagatcaacgaccactt
gcacggggtgccgacttcattcgtgggggtcctgctaatgattgggttgaatcttttcgg
cctccggggctccctgaatttggaggagcagaatcacgctttgcagaatttgatcaaatt
tataacaatacaggcacaacctttggaccgcccttggatggtccaccacaaaggttgttg
tctggtgtcttgcattcttttcttgcaagtggccgggctggtgtgccatttcaacctgtt
ccagtaccagcacttgggttatctgaaagtgacaaacaatgcatacgtgatcgtagctgc
ataatggcacgtcatgttttggctgaccaacctgaagagtatatacaggcccaggtcaat
acgttgctgcattcgcttgatattggcaatgattatcgaatgagaggccccatgcatgga
ccatacccagagctggaggagtattggagtcagtcccaaagtgctatgagatctgcccca
atgcataattctgcagataaatggattactgagttcggcaagcaaaatagtagcccagaa
gattgggcatactcttttgagcagcaatatggtcccagtggttgggcctctgaatttgaa
cagcatcagtctcagatggccatgggtcatatggggggagcgaacatggcaaacctggct
gctatggagcaatcccgtatgcttgcacaaacattagcaagtaataatgatccaaagttt
cagaattctaagttcttccagtttgtttcaaagatgagccgtggtgaacttattatagaa
gataatcaagtaaaacaaggttcagcatcccaatccagtggctgggctgatgaatttcaa
acacagtacaattctaatgcaaactcatgggctgatcagtttgtgcatgaagagctttca
cagggagcggacaagtgggttagcgagttctctagtgaacataatcagggtgggataaat
aagaactgggttgatgagttctcgaaattaaatgtcactgataaatgggcagaggagttc
agtggaggaggttttggtgaaagttctgctgatccatgggtagatgagttccaagaacaa
ttggtagcttctaaacaaagttcaggtgcttctcgaggggtttatgtcttttctgagatg
aatccgtatgttggtcaccctaatccaatgcaggaaggacaggatctcttccacaagggc
ctcttaagtgaagctgttcttgctttagaggctgaagttttgaagaatcctgataatgct
gaaggttggaggttgcttggaataactcatgcagaaaacgatgatgaccaacaggccatc
gcagcaatgatgcgggcgcacgaagctaatccaacaaacctggaagttcttctctctctt
ggtgtcagtcacacaaacgaattggagcagggagaagcattaagatatctttataggtgg
cttcagaatcatccaaaatatgggggccttgcccctccacagtcaactgattcaccttat
ggtcctgatgttgttagattgtttaatgaagctgctcagatgtcacctgaagatgctgat
gtccatatagttctgggagttttatacaacctatcaagagaatatgataaagctatagct
tcatttaagacagcactacagctcaaaccacaggactattcgctctggaacaagcttggt
gcaacccaagcaaacagcatccaaagtgctgatgcaatattggcatatcagcaggctcta
gacttgaaacccaactatgtgcgtgcatgggccaatatgggaattagctatgccaaccag
ggtttgtacgaagattctattcgatactatgtaagggcagttgcgatgaatccaaaagct
gacaatgcctggcagtacatgaggatttcccttagtaatgcttcacgagctgatatgatt
gctgcatgcgattcccgcaaccttgacgcccttcagaaagagtttcctctgtga
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