Phragmites australis (common reed): 133895395
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Entry
133895395 CDS
T10575
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
paua Phragmites australis (common reed)
Pathway
paua03015
mRNA surveillance pathway
paua04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133895395
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133895395
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
paua01009
]
133895395
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133895395
03036 Chromosome and associated proteins [BR:
paua03036
]
133895395
Protein phosphatases and associated proteins [BR:
paua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
133895395
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
133895395
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
133895395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
PPFR1_M
PPP2R1A-like_HEAT
HEAT_2
PIK3R4-like_middle
RELCH_N
RELCH_C
HEAT_EZ
HEAT_EF3_N
Vac14_Fab1_bd
PDS5
Htt_N-HEAT_1
HEAT_GCN1_C
TPR_DNAAF5
TOR1L1_N
Adaptin_N
CLASP_N
Cnd1
HEAT_GCN1_C_2
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
133895395
NCBI-ProteinID:
XP_062191673
LinkDB
All DBs
Position
16:complement(14658184..14668023)
Genome browser
AA seq
587 aa
AA seq
DB search
MAMIDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDE
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGAQMKEI
DIVDWFVPVVKRLASGEWFTARVSSCGLFHIAYPSASEPLKAELRTIYGQLCQDDMPMVR
RAAASNLGKFAATVEQGNLKTEIMSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCAT
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRADLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPQLAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLEDKVFSIRDAAANNLKRLAEEFGPDWAMQHIIPQV
LEKINNPHYLYRMTTLQAISLLAPIMGADITCQQLLPVVIASSKDRVPNIKFNVAKVLQS
LVPILDQSVVEKAVKPCLVELGEDPDVDVRYYANQALQACDQMMISS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatgatcgatgagcctctgtacccgattgctgtactgattgatgaactgaaaaat
gaagatattcagttacgtctgaactccatcagaagactttctactattgcccgggcactt
ggtgaagaaagaacaaggaaagaattaattcccttccttagtgaaaacaatgatgatgag
gatgaggtgcttcttgcaatggcggaagagttgggtgtgtttattccttatgttggaggt
gtagagcatgcgcatgttttgcttcccccattggaaactttgtgtactgtggaggagacc
tgcgtcagagataaggcagttgagtcgttgtgtcgaattggagcacagatgaaggaaatt
gatattgtggactggttcgtccctgttgtaaagaggttggcgtctggtgagtggttcaca
gctcgagtatcgtcatgtggcctttttcacatcgcctatcctagtgcatctgaaccactg
aaggcagaattaaggaccatttatggccagttatgccaagatgacatgcctatggtaaga
agagctgctgcatcaaatcttggaaagtttgctgcaacagttgaacagggcaatttgaag
acagaaatcatgtcaatatttgatgatttaactcaagatgaccaagattcggtgcgacta
ttggcagttgagggttgtgctgctcttgggaagttgttagagccccaagactgtgcaaca
catattcttccagttattgtaaatttctctcaggataaatcgtggcgcgtgcgttatatg
gtggccaatcaattgtatgagctctgtgaagctgttggtcctgagcctacaagggctgat
ctggtacctgcatatgttcgccttcttcgtgataacgaagctgaagtgcgaattgcagct
gctggaaaagttacaaaattttgcaggatattaagcccacaactcgctatccaacatatt
ctcccatgtgtcaaggaattatcatcagattcatcgcagcatgtccgttcagcattggct
tcagttattatggggatggcccctgtattgggaaaggatgccacgattgagcaacttctt
ccaatttttctctctttgctgaaggatgagtttcctgatgttcgactcaacataataagc
aaacttgatcaagttaatcaggttatcggaatcgacttgctatcgcaatcacttctacca
gctattgtagaacttgcagaggataggcactggagagttcggcttgccataattgagtac
atacctttgttggcaagtcagttaggtgttggattttttgatgacaagttaggggcactt
tgcatgcagtggttggaagataaggttttctcaatcagagatgctgctgccaacaacttg
aagcgtttggccgaagaattcggccctgactgggcaatgcagcatataatccctcaggtt
ctggagaagataaacaacccacattatctgtatcgaatgaccactttgcaagctatttct
ttgctggcccccatcatgggtgctgacattacatgccaacagctgctccctgttgtcatc
gcttcctcaaaggacagggtgccaaacattaaattcaatgtcgccaaagttctgcagtca
ctcgtacccatccttgatcaatctgttgtggagaaggcagtgaaaccatgccttgttgag
ctcggtgaggacccagatgtagatgtaaggtactatgcaaaccaggcccttcaggcatgt
gaccaaatgatgatttcaagctaa
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