Phragmites australis (common reed): 133895447
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Entry
133895447 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133895447
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133895447
03036 Chromosome and associated proteins [BR:
paua03036
]
133895447
Spliceosome [BR:
paua03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
133895447
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
133895447
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
HAT_Syf1_CNRKL1_C
ARM_TT21_5th
PRP6_TPR
xRRM
Lsm_interact
TPR_19
TPR_CcmH_CycH
GspL_C
TRM82_WD
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
133895447
NCBI-ProteinID:
XP_062191746
LinkDB
All DBs
Position
16:1000926..1010421
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AA seq
833 aa
AA seq
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MATPMEEEVPEAAAPVVGGGDDVEVPAAPSSDSDSDSLDSDDDGAAGADELRIQALEQTL
QEQPLDYETHVQYIQCLRKSGNIEKLRVAREEMNKHFPLTPKMWQEWAKDEISLSMSAKS
FGDIEKLYERGVQEYLSIKLWRDYLDYIEEHDPSVSQCSPSGLSKMRDLFERAITAGGLH
VTEGSKLWSAYREYEMAILITIAEGNDEEKAKQVQRIRTLFHRQLSVPLADMESTLVEYK
SWEAEQGNANDPGSDFDGVPSNVVNAYKKANDMYNERKKYEDQLSNVCASEADKLQEFLT
YIKFEESFGGPARVQVLYERAVSALPVSSDIWMGYTSYLDGTLKVPSILRSVYHRATRNC
TWVGDLWVRYLLSLERIRASEEELRHVFEQAVQCSFPTIKEYLDVYLTRVDSLRRRISDG
LDFQLIRQTFMDAAEFLSPQLGIDELLLFHAYWATLERNLGKDLTAARRVWENILKKSGS
FLEVWQHYISMEIEMGHIHEARSLYKRCYSKKFAGSGSEDICHAWIRFERVHGTLDDYDL
ALKKVIPRLKELLMFKAQQEAKVEAYSVPNDTSNANDSSQKRKPSKMTSKQQPPAKKRKE
NPPKSTMSSDDQGPKAQSGNSGAVEVGEVSREKVEASLEMKVDGESRTRNTSSNEPKPYF
YNDKCTVFVSNIDLKANEEHLRHFFSDIGGVTAIRLLKDKITKKSRGLAYVDFSDNEHLE
AAIKKNRQKLLGKKVSIARSDPSKSKKSREAGPSSKGQDKLSQSGDDGASAPGSSRPDKE
IPKGDMEITGKNTFAAPRAVVKPLGWTQRDEKSDGGAGELKSNEEFRNLLLKK
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccgatggaagaggaggtgccggaggcggcggcgccggttgtcgggggaggg
gacgacgtggaggtgcccgccgccccgtcctcggactccgactcggactcgttggactcc
gacgacgacggggcggccggcgcggacgagctccgcatccaggccctagagcaaaccctc
caggagcagcctctcgactatgagacccacgtgcagtatatccaatgcttgaggaagtca
ggaaacattgagaagcttcgtgtggcaagggaagagatgaacaagcacttcccgcttacc
ccaaagatgtggcaggagtgggcgaaggatgagatctcattgagcatgagcgccaaatct
tttggtgatattgaaaaactctatgagcgtggggtgcaagagtatctgtccattaagtta
tggcgggattaccttgattatattgaagagcatgatccgtcagtgtctcagtgttcacca
tctggcctctccaagatgagagatttgtttgagcgtgctattactgctggggggctgcat
gtaactgagggcagcaaactatggtcagcttatagagaatacgagatggccattttgatc
accattgctgaaggcaatgatgaggaaaaggcaaagcaggttcagcgcatacgcacgctc
ttccaccgccaattatctgttcctttggctgatatggaatcaacacttgttgagtataag
agctgggaagccgagcaaggcaatgcaaacgatccaggttctgattttgatggtgttccc
tcaaacgtcgtaaatgcttacaaaaaggccaatgatatgtacaatgaaagaaagaaatat
gaggatcaactaagcaatgtatgtgcttccgaagctgacaaactgcaggagtttctgaca
tacatcaaatttgaggagtctttcggtggccctgctcgtgttcaagttctttatgaacga
gctgtttcagcgcttcctgtttcaagtgatatatggatgggatacacaagttacctggat
ggaaccctgaaggtgccttccattcttagaagtgtttatcacagagccacacgaaactgt
acatgggttggtgatctatgggtccgttatctgctgtctttggagcgtattcgtgcttct
gaagaggagctgcggcatgtatttgaacaggcagtacaatgttcgttcccaaccataaaa
gagtatctcgacgtttatcttactcgagttgatagtttaagacggaggatttcagatgga
ttggatttccaactgattaggcagacattcatggatgctgctgaatttctctcacctcaa
ctgggaattgacgagttgttgctctttcacgcgtattgggccacattagagcgtaatctt
ggcaaagatctaactgcagctcgtagagtttgggaaaacattctcaaaaaaagtgggtct
tttctggaagtctggcagcactacatttcaatggagatagaaatggggcatatacatgag
gcgagatcactttataagcgctgttatagcaaaaaattcgctgggtctggatcagaggac
atatgtcatgcgtggataagatttgaaagggtgcatggcaccttagatgattatgacctt
gctctaaaaaaggtcatccctcggttaaaggagcttttgatgttcaaggctcaacaggag
gctaaagttgaggcttactctgtccccaatgatacttctaatgcaaatgattcctctcag
aaaagaaaaccaagtaaaatgaccagtaaacagcagccccctgctaagaaaaggaaagag
aatccacctaaaagcaccatgtcatcggatgaccaaggaccaaaggcacaaagcggaaat
agtggggctgtagaagttggagaggttagcagggagaaggttgaggcatctctggaaatg
aaagtggacggtgagagccgaacaaggaatacaagttcaaatgaaccaaagccatacttc
tacaatgacaagtgcacggtatttgtgtcaaatatagatttgaaggcaaatgaagagcac
ctccgacatttcttttctgacattggtggcgtgacagcaataaggttgctgaaggacaaa
atcaccaaaaagtcaagggggttggcctatgtggacttttcagacaatgagcatcttgag
gctgccattaagaaaaacaggcagaagttgctcggaaagaaagtgagtatcgctcgttca
gatccaagcaagagtaagaagagccgtgaagcaggcccttcctccaaaggccaggataaa
ttgtctcagagtggtgatgatggtgcaagcgcaccaggatccagtagaccagacaaggaa
atacccaaaggtgacatggaaatcacagggaaaaacaccttcgctgcaccacgagccgtg
gttaaacctcttggatggacccaaagggatgagaaatcagatggtggcgcaggagagttg
aagtcaaatgaggagttcagaaatctattacttaagaagtga
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