Phragmites australis (common reed): 133895813
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Entry
133895813 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP-like
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Pathway
paua04120
Ubiquitin mediated proteolysis
paua04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133895813
04120 Ubiquitin mediated proteolysis
133895813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
paua03110
]
133895813
04131 Membrane trafficking [BR:
paua04131
]
133895813
04121 Ubiquitin system [BR:
paua04121
]
133895813
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133895813
Chaperones and folding catalysts [BR:
paua03110
]
Other chaperones and cochaperones
Others
133895813
Membrane trafficking [BR:
paua04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
133895813
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
U-box type E3
133895813
Multi subunit type E3
STUB1-CHIC2 complex
133895813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
TPR_1
TPR_2
TPR_11
ANAPC3
TPR_17
TPR_8
TPR_14
TPR_BSK1_C
zf-NOSIP
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
133895813
NCBI-ProteinID:
XP_062192314
LinkDB
All DBs
Position
16:complement(994687..999182)
Genome browser
AA seq
269 aa
AA seq
DB search
MSPAASKRQADLLKQEGNAFFQKERISAAIDAYTGAITLCPNVAVYWTNRALCYKKRNEW
TKVEEDCRTAIQLENHSVKAHYMLGLALVNRQKLSEGIKALEKSLELGRGAHPASYMVEA
IWQQLSKAKYIEWESLSRERATQLRKLKVACKEAICNYNSLGNPAADAPEEQLNELEEVF
KKAAKTDTPTEVPDHLCCKITLDIFRDPVITPSGITYERAALFGHLHMVGKFDPVTREAL
EPHQLVPNLAIKEAVDSFLSEHGWAYKIR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgtccccagcggcgtcgaagcggcaggcggacctgctgaagcaggagggcaacgccttc
ttccagaaggaacgcatcagcgccgccatcgacgcctacaccggggccataactctctgc
cccaatgttgcagtatattggacgaaccgagcactttgctataagaagcggaatgagtgg
actaaggttgaggaagattgtagaacggccatccagcttgaaaatcactctgttaaggca
cattacatgctcggtcttgcacttgtcaacaggcaaaaattgtctgaaggaataaaggct
ctggagaagtccttggagcttggaagaggtgcacatcctgcaagttacatggttgaggca
atctggcaacagctttctaaagcaaaatacatcgaatgggaaagcttatctagagagcga
gctactcagttgcgtaagctgaaggtagcatgtaaagaagctatttgtaactataacagc
cttggtaatccagctgcagatgcacctgaagaacagctaaatgagctcgaggaagttttc
aagaaagctgcaaagactgatactccaacagaagttcctgaccatctctgttgcaaaatt
acacttgatatcttcagagaccctgtgatcaccccaagtggaattacttatgagagggct
gcactttttggccatcttcatatggtgggcaagtttgaccccgtgactcgtgaagcgctt
gaaccacaccaactggttccaaaccttgccatcaaggaagctgtagattcatttttgagt
gaacatggatgggcttacaagataagatga
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