Phragmites australis (common reed): 133895984
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Entry
133895984 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133895984 isoform X1
KO
K15082
DNA repair protein RAD7
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paua03400
]
133895984
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
133895984
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GFIT
Motif
Pfam:
LRR_NXF1-5
LRR_4
Cep57_CLD_2
Motif
Other DBs
NCBI-GeneID:
133895984
NCBI-ProteinID:
XP_062192490
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Position
16:complement(23510818..23516646)
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AA seq
898 aa
AA seq
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MPHLRSRAKARSASQQSPPPAAGVPQGTPAPSPSTSLGLGLGLGPASPDDVWGSLKSPGA
AAPRRSLRLAGAASPTMPTAGPSAREGGSSGPGPGSGGSGEGVGRARVRASASPGASPWA
GNSGSDGGGSGGRVLAGDAGTSMSLRSGSQIAKRRMETGAQVGGEAGLGSGEGVGGGGQV
HDEMLQRDTGAAAKRCHIILVGGFETEYVADSESDDDEDCVMLGELGMKMPAAQLPTGPS
MVAPSVVSMNMDSADEATGDDPAKTGKEEIGDVSSGEQDLLHGESMYTHNLVGRAVGGVF
QQLPYTVGSPETDIYADMYFKEELRRYKPREVKGRGKLVLGNNDSGADASVGIRDGTRTH
KYSPDSKGKEKMVVEDSLSSLSASEDGMNLDPLDSKETQSNSRSVSASMEPLRRQAARER
AIRLAPNFAFFNADKEEHSEDDDTEDLEPVADPQDWPGPFSTAARIYEDRDAKLRARESN
SSKLYKSADKVIVWSPLKDRENPVRAAPSLTSLCLNTLADNAESIESLGGIPEELKHKLL
KMLCHSRKMNTHLLNELLCDSPTELQLSECSWLSEDDFEKTFGKCRTENLQILQLDISGR
CMPDYILPTTLAKVPNCMPLLRKISLKGNYRLSDKGLDTIISAAPSLSVLNLCECSLLTS
SGIEILANKLHSVLRELYIDDCINVEAMMILPVLQKIKHLEVLSMSGIQSVCDKFVNELI
PVHGSNIRELAFAGCSKLTSSSIKTIGENCPQLSSLDLRNLNRLRDSAMRHLRNGCGQIK
TLKLQRNTFSDESVSQYLEESGGCLTELMLNNVEKAGDLTALAIARTCSACLEDLDLSFC
RELTNEALGLIVDSCSSLRILKLFGCTQITDFFLKGHSNPSVKIVGIEGSILEQMDNR
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgccccacctccgctcccgcgccaaggccaggagcgcctcccagcaatcgccgcctccg
gcggccggtgtcccgcaggggactcccgcgccatccccgtccacatccctcggcctcggc
ctcggcctcggccccgcctcccccgacgatgtctggggatccctcaagtcccccggagct
gcggcgccccgccgcagcctgcgcctcgcgggcgccgccagcccgaccatgcccacggcg
gggccttcggcgcgagaaggcggttcctctggtcccgggcccgggtcgggtgggagcggg
gagggggttgggagggctcgggttcgagcctccgcctcccctggcgcctcgccgtgggcc
gggaactcggggagcgatggcggcgggtcggggggtagggttttggcgggcgatgcgggg
acgtccatgagcctgcggtcggggtctcagatcgcgaagaggcggatggagacgggcgct
caggtgggtggagaggcggggcttggatcaggcgaaggggttgggggtggaggccaggtg
catgatgaaatgctgcagcgggacacgggagcggcggcaaagcggtgccatatcatattg
gttgggggatttgagacggagtatgtggctgattcggagagcgatgatgacgaggattgc
gtgatgctgggggagctgggcatgaagatgccagccgcgcagttgcccactggtccaagt
atggttgcaccgagtgtggtttcgatgaacatggatagtgctgacgaggcaactggggat
gatcctgccaagacaggcaaggaggaaattggagatgttagtagcggggaacaggatctc
ttgcacggggagtctatgtacacacataatttggttgggagggcagttggcggcgtgttt
caacaattaccatatactgtaggaagccctgaaacagatatttatgcagatatgtatttc
aaggaagagttgagaagatacaagcctagagaggtcaaaggaagagggaagctagttttg
gggaataacgattctggtgctgatgctagtgtgggtattcgagatggtaccaggacgcac
aaatatagtcctgatagtaaaggaaaggaaaagatggttgtagaagatagtttatcatct
ttgagcgcaagtgaggatggtatgaatttggatccattagattctaaagagactcagagc
aactcaagatcagtttctgcttctatggagccacttcggaggcaagcagcaagagagagg
gctattaggttggcccctaactttgcattcttcaacgcagataaagaggaacatagtgaa
gatgatgatacagaagatttagagcctgttgctgaccctcaggactggccaggtccattt
tcaacggcggcgaggatatatgaagatagagatgctaaattgagagctcgagagtcgaat
tcttctaagctgtacaagtctgctgataaggtcattgtttggtcgcctttgaaggatagg
gaaaacccagtacgagctgctccatcacttacaagcttatgcttaaacactcttgcggat
aatgctgaaagtattgaatcacttggaggtattccagaggagctaaagcataaactcttg
aagatgctgtgtcattctaggaagatgaatacccatcttctcaatgaactattgtgtgac
agtcctacagaactgcagcttagtgagtgctcatggttaagtgaggatgattttgagaaa
acttttgggaaatgcaggacagaaaacttgcagattctgcagcttgacatatctgggcga
tgcatgcctgactacatattgcctactaccttagcaaaggttcctaactgcatgcctctg
ttgagaaaaatatctctgaagggaaattatcgtctttctgataagggtttagacacgatc
atctccgcggcaccttctctaagtgttctaaatttgtgcgagtgttctcttcttacttca
tctggaatcgagattcttgctaacaagttacattcagtacttagggaactgtatattgat
gactgcataaatgtggaggctatgatgatcctccctgttctacagaagattaaacatcta
gaggttttatcaatgtctggaatacaatctgtctgtgacaagtttgtgaacgagctcatt
cctgtacatggttcaaatattagggagctagcatttgccggttgctcgaaacttacctca
tcttccatcaagactattggggaaaactgtccacagttatcttctttagaccttcgcaac
ttgaataggttgcgtgactcagcaatgagacatcttcgcaatggttgtgggcaaataaag
acattaaaacttcaaagaaacacattcagtgatgaatctgtgtctcaatatttggaagaa
tccggaggatgcctaactgagttaatgctaaacaatgttgagaaggctggagaccttact
gctcttgcaattgctcgcacgtgttctgcttgcttagaggatctggatctttccttctgc
cgtgaactgaccaatgaagctttagggctgattgttgacagctgctcatcattgaggatt
ctcaagctatttgggtgtacccagatcacagattttttcctcaagggtcactcaaaccca
tcggtcaaaattgtcgggatagaagggagcatactggagcaaatggataaccgctag
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