Phragmites australis (common reed): 133896160
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Entry
133896160 CDS
T10575
Name
(RefSeq) protein CCA1-like isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
paua Phragmites australis (common reed)
Pathway
paua04712
Circadian rhythm - plant
Brite
Transcription factors [BR:
paua03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
133896160
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GFIT
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NCBI-GeneID:
133896160
NCBI-ProteinID:
XP_062192667
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Position
16:3615451..3632734
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AA seq
720 aa
AA seq
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MEVNSSGEKMVVKVRKPYTITKQRERWTEVEHKRFLEALKLYGRAWQRIEEHVGTKTAVQ
IRSHAQKFFTKLEKEAINNGTSLVQAHDIDIPPPRPKKKPNSPYPRKSGLGSETPSKEVP
NDKSTKSNMKLSNGNVQMAGDASPQNLQRKEVSENGSCSEVLNLFRDAPSASFSSVNKSS
SNHGAPRVIEQTKTEIKDMTTTEKNSLSVDVQEVVKDINDPEMERLNGIHISSKSDHAHE
EYLDTSRQQMRLKPMSVETTYVDRQTARASHPLMERNGATSILVTRTEGTHSNQTNDQEG
ANGSMNPCIHPTLSVDQKFDSSATPQPFPHHYTAFAPMMQCNCNQDAYRSSVNMSSTFSS
MLVSTLLSSPAIYAAARLAATYWPAAESNTSVDQNQENPAEGTQGRNIDTSPRMASIVAA
TVAAASAWWTTQGLLPFFPPPMAFPFVLAPSAAFPTADVQRASEKDRNCQVENAQKECQE
ARIQGRTEGLRVATSSESDGSKKGELSLHTELKISPVQNADTTPATGTDTSDVFRNKKKQ
DRSSCGSNTPSSSDLEADNVPEKQDKANGNAQQASCSNSSAGDTNHRRFRSSGSTSDSWK
EVSEEGRLAFDALFSREKLPQSFSPPQAEESKEITKEEEDEVTTLTVDLNKNATAIDNDL
NTMDGPRASFPNELSHLNLKSRRTGFKPYKRCSVEAKENRVPASDEVGTKRIRLESEAST
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggaggttaattcttctggtgagaaaatggtggtaaaggtaagaaagccatacacaata
acaaagcagcgggagcggtggactgaggtggagcacaaacggttccttgaagccttaaaa
ctttatggcagagcatggcagcgcatagaagagcatgttgggacaaagacggctgtgcag
atcagaagtcatgctcaaaagttcttcaccaagttggaaaaggaagctatcaacaatggt
acttctctggtgcaagctcatgacattgacatacctccaccaaggcctaaaaaaaagcct
aacagtccatatcctcgaaaaagtggtctcggctctgagacaccgtccaaggaagttcca
aatgataagtcaacaaaatcaaatatgaaattgagcaatggcaatgtacaaatggcaggc
gatgcatctccgcagaatcttcaaagaaaggaggtgtctgaaaatggaagttgctcagaa
gttcttaatctctttcgagatgccccatctgcatcattttcttcagttaacaaaagctct
tcgaatcatggtgcacccagggtgattgaacaaactaaaacagaaatcaaagatatgacc
accacggaaaaaaattctctttccgttgatgtgcaagaggttgtaaaagatatcaatgat
ccggaaatggaaaggcttaatggaatccacatcagctccaaatctgatcatgctcatgaa
gaatatttggatacctcaaggcaacaaatgaggctaaagccaatgtctgtggagacaaca
tatgtggacagacaaaccgcaagagcttcacatcccttaatggagagaaatggggcaact
agcattctggtcactagaactgaaggaactcattctaaccaaacaaatgatcaagaggga
gccaacggaagcatgaacccatgcatccatccaacactttctgtggatcaaaaatttgat
agcagtgccacaccacagccctttcctcaccattatactgcctttgcaccgatgatgcaa
tgcaattgcaaccaagatgcctacaggtcttccgtcaacatgtcatccaccttctccagc
atgcttgtttccacattattgtcaagccctgccatctatgcagccgctaggcttgcagcg
acgtactggccagcagcagaaagtaacacttctgttgatcaaaatcaagaaaatcctgca
gagggtactcaaggaaggaacatagacacctctccaagaatggcttctattgtagcagct
acagtggctgcagcatctgcatggtggacaacacaaggtcttcttcctttttttcctcca
cccatggcttttccatttgtcctggctcctagtgctgcctttcccacagcagatgttcaa
cgagcttcagagaaagacagaaattgccaggttgaaaatgcacagaaggaatgccaagaa
gctcgaatacaaggccggactgaaggtttaagagttgccacgtcttcggagtctgatggg
agcaaaaaaggcgagttgtctctccacactgaattaaagatatctccagtccagaatgcg
gacaccacacctgcgacaggaactgacacaagtgatgtgttcagaaacaagaaaaagcag
gatcgctcttcatgcggttccaacacaccttcaagtagtgatttagaggcagataatgtt
cctgagaagcaagacaaggctaacggcaatgcacagcaagcctcctgcagtaattcttca
gccggtgacactaaccaccgcagatttaggagcagtggaagcacaagtgattcgtggaag
gaagtttctgaagagggtcgtctggcttttgatgcgttgttcagtagagaaaagcttccc
cagagcttttctcctccgcaagcagaagaatcaaaggagattaccaaggaggaggaagat
gaagtgaccacgttgaccgttgacctcaacaagaacgccacagctatcgataatgacctc
aatacaatggatgggccaagagcttcctttcccaatgaactgtcgcacctgaatctgaaa
tcccgccgaacaggcttcaaaccttacaagaggtgctcggtggaagcaaaggagaatagg
gtgccggctagtgatgaggttggtaccaagaggattcgtcttgagagcgaagcatctacc
tga
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