Phragmites australis (common reed): 133896305
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Entry
133896305 CDS
T10575
Name
(RefSeq) pumilio homolog 5-like isoform X1
KO
K17943
pumilio RNA-binding family
Organism
paua Phragmites australis (common reed)
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NCBI-GeneID:
133896305
NCBI-ProteinID:
XP_062192868
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Position
16:complement(27181458..27189584)
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AA seq
1048 aa
AA seq
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MFCVVDGAWVLVRSVLRGGKCVLLCDSGGGEVLPLMESLKCVPAIYEGLLGLMATESAVR
LIGGTGARGWSKDFGAFDSPVGNLSGEDLGFVDNGTGAYGGWRESVPNRSGSAPPSMEGS
LVALGHLIGQQSGSFEASLANLDNVTDNSKSEEQLCADPAYFEYYGSKVNLNPRLPPPLI
SRESRRMMNRVGKVKEWRVVSQDNSSKGSLFVPRSTLSTHREEPEDDKSPRLDSSSVEDA
HIVSSQNASNFESQDYILESFQQSVASLPDSSSSHPSNSNTGNAMAVHSDINFSRSLSVD
ALKQSDFNSWTPKSPLESTVRNDLSLPPLSSSSYSGSKTSVQTSQQEKPTVDTKPGNFVP
GTGAVVTELDTVDSNMKNLKLSLDVHTSSSVNQKWQDNTLQQYGSLLPVQGDPIQMTPQG
THLSHVPFVDNLSHSQLKLPAGDMHQFLPQPGMTTPFYSSNSFGSPYYQNLHPTSVLPTS
FGTAGYALSGSVLPPVMASYAPQGSLATPLDSPMTPSFSGRPSGFPVAGNLTGGADFMQS
YKLYGQLGVAMQPPIPDPNFIPFFQHPSLLQYAGGNHYNTMGPRFTVAGNLAESFDPRKM
IPQAAYPSDQRLQLPRTGFSNSPTARRGGAVPNYQGISPYVGVPMTYPTSPVFQGQTLPG
VLPPGRRNDSVGFQSPSRNMIANPGIQGQRERQKFDEPKACSFLDELKSNRARRVELSDI
TGRIVEYSADQHGSRFIQQKLENCTAEEKASVFAEVLPHAPSLMTDVFGNYVIQKFFEHG
TREQRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKIDLVRELDGHVMRCVRDQN
GNHVIQKCIECVPMEHIGFVVSAFQGQVASLSTHPYGCRVIQRVLEHCGGDSLGQCIIDE
ILQSACTLAQDQYGNYVTQHVLERGKTHERSQIINKLAGQVVTMSQNKFASNVIEKCFQH
GDIAERDLLIRQIIEQTEGNDNLLAMMKDQYANYVVQKILEICSESQRELLLSRVKGHLQ
ALRKYTYGKHIASRVEQLCGDGAAELDS
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgttttgtgttgtggacggtgcttgggtgttggtgagatcggttttgcgcggggggaaa
tgcgtgcttctgtgtgattctggcggtggtgaagtgcttcctttgatggaatcgctaaaa
tgtgttccggctatctacgagggtttgttgggtctaatggctactgagagtgccgtccgt
ttaattggtgggacaggggctaggggctggagtaaggactttggtgcatttgactctcca
gtgggtaatctttcaggagaagatctgggatttgtggataatggcactggggcttatggg
ggctggagggaatctgtcccgaatcgcagtggaagtgcaccgcctagtatggaaggatct
cttgttgctcttggtcatctcataggtcagcagagtgggagcttcgaagctagtttggcg
aacttggataacgtgactgacaattccaagtctgaggagcaactctgtgctgatccagca
tattttgagtattatggctccaaggttaatctgaacccaaggcttcctccaccacttatt
tcaagggagagccgccgtatgatgaatcgggttggcaaggttaaagaatggagggtggtc
tcccaagataacagcagcaaaggctccttatttgtccctcgatctactctatcaactcac
agagaagaacctgaggatgataaatctccaagattggattctagttcagtggaagacgca
catattgtctccagtcaaaatgcatccaattttgagagccaggattatatactggagagc
tttcagcaaagtgttgcttctttgcctgacagttcatcttctcatccttcaaatagcaac
accggcaatgctatggctgtccattctgacataaatttttcgaggagtttatcagttgat
gctctcaagcaatcagatttcaactcttggacacctaaaagcccactggaaagtactgtt
agaaatgacctttcattgccacccctttccagttcatcatattctggcagcaaaactagc
gtgcaaacttctcagcaagaaaagcctaccgtagacaccaaacctggaaattttgtgcct
ggcactggtgcggttgttactgaacttgataccgtggactccaatatgaagaatttgaag
ttaagcttggatgtccatacatcctcatctgttaaccagaagtggcaggacaatacctta
cagcagtatggctccttgcttccagtccaaggtgatcctattcaaatgactcctcaagga
acacatctttcccatgttccttttgttgacaacttgtctcatagtcagcttaagttacct
gctggtgacatgcatcaatttttaccgcaacctggtatgacaacacctttttattcatca
aattcttttggaagcccttattaccagaatttgcaccccactagtgttttaccaacttca
tttggaactgctgggtatgctttaagtggttcagttttgccacctgttatggctagttat
gctccccaaggctctcttgctacacctcttgacagtcctatgaccccaagctttagtggc
aggccatctggttttcctgtagcagggaatcttaccgggggagcagattttatgcagtca
tataaattgtacgggcaactcggggttgctatgcagccacccattcccgatccaaacttc
attcctttcttccagcatccatctttgcttcagtatgctggtggaaatcattacaataca
atgggaccaaggtttactgttgctggaaatctcgctgaaagctttgatccacgaaagatg
atacctcaagctgcatatccatctgatcagaggcttcaacttccaagaactggattttct
aattctcctacagccagaagaggaggggctgttccaaattatcaaggcatttcaccctac
gttggagtaccaatgacatatcctacaagtccagtgtttcagggacaaactttgcctgga
gtactacctcctggtaggagaaacgactctgttggattccaatccccctcaagaaacatg
attgctaatcctgggatccaagggcagcgagaaaggcagaagtttgatgaaccaaaggcc
tgctctttcctagacgagttaaagtccaacagagctcgtagggtcgagctatctgatatc
acaggtcgtatagtagaatacagtgctgaccaacatggtagccgattcatccagcagaag
ttggaaaactgcactgctgaagagaaggcatctgtgtttgcagaagttcttcctcatgct
ccatcattaatgactgacgtttttgggaattatgtgatccaaaagttctttgaacatgga
acccgtgagcaaaggagggatcttgccactaagcttgttggtcatgttttgcctttgagt
cttcagatgtatggctgccgagtaattcaaaaggctcttgaagttatggaacttgaccag
aaaatagatctagttcgtgagcttgatggacatgttatgcgatgtgttcgtgatcagaat
ggaaatcatgttatacagaagtgcattgaatgtgttcccatggaacatattggtttcgtg
gtatctgcttttcaaggacaagttgctagcctttcaacgcacccatatggttgccgtgta
attcagagagttttggagcattgtggtggtgattcactaggccagtgcataatagatgag
atattgcagtcggcatgcacccttgcgcaagatcagtacggtaactatgttacacagcat
gttctagaaagaggaaaaactcatgaaaggagccaaattatcaataaattggctgggcag
gttgttaccatgagccaaaataaatttgcatcaaatgtgatagagaagtgttttcagcat
ggggatattgcggagagggatcttctgatcaggcagatcatagagcagacagagggcaat
gacaatttactggcgatgatgaaggatcagtatgctaattatgtggttcagaagatactt
gaaatatgcagtgagagtcagcgggaactcctgctcagccgtgtaaagggtcatctgcaa
gcattgaggaagtacacctatggcaagcatatcgccagccgagttgagcagctctgtggt
gacggagctgccgagttggattcttaa
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