Phragmites australis (common reed): 133896369
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Entry
133896369 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG4-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133896369
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133896369
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133896369
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
zf-C3HC4
Prok-RING_4
zf-C3HC4_2
zf-RING_2
Sina_RING
zf-RING_5
zf-RING_UBOX
vWA-TerF-like
TerY_C
Motif
Other DBs
NCBI-GeneID:
133896369
NCBI-ProteinID:
XP_062192947
LinkDB
All DBs
Position
16:2065006..2073578
Genome browser
AA seq
405 aa
AA seq
DB search
MGGAFGALFGRRTAGRSAPTARRRGLGRQPSAHDAAGGGHRRAVLAKKYSFIPDTYTSLE
QVAAALREQGLESSNLILGIDFTKSNEWTGKRSFGGQSLHRLGDTPNPYEQAISIIGKTL
APFDEDNLIPCFGFGDVTTHDYNVFSFHPDNSPCHGFEEVLACYRKIVPHLRLSGPTSFA
PIVEAAVDIVDRSGGQYHVLVIVADGQVTRSVDTSDSELSPQERRTMDSIVMASTYPLSI
VLVGVGDGPWEDMQKFDDKLPARDFDNFQFVNFTSIMARSTTPQQKESAFALAALMEVPI
QYRATVELGILGRSTGKTKRVVPAPPPLPHAQRQPSLRRGDSNVSAGAAQPAAPRDDQVC
PICLTNAKDLAFGCGHMSCRECGENLTRCPICRQAIRSKLRLFSG
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgggcggtgcgttcggcgcgctgttcggccggcggacggctgggaggtcggcgccgacc
gccaggcgccggggcctgggacggcagccgtcggcgcacgacgccgccggcggtgggcac
cggagagccgtgctggccaagaagtactccttcatacctgacacctacacatcactcgag
caggtggcggcggcgctgcgcgagcagggcctcgagtcgtcgaacctgatcctgggcata
gacttcaccaagagcaacgaatggacagggaagcgttctttcggcgggcagagcctgcac
aggctcggcgatacgccgaacccctacgagcaggccatcagcatcatcggcaagacgctg
gctccgttcgacgaggacaatctcatcccctgcttcggattcggcgacgtaaccacccat
gactacaatgtgttcagcttccacccggacaactcgccgtgccacggcttcgaggaggtc
ctggcttgctacaggaagatcgtgccgcacctcaggctatcggggccgacgtcgtttgcg
ccgatcgtggaggcggcggtcgacattgtggacagaagtggagggcagtaccatgttctt
gtcatagttgccgatggccaggtgactagaagtgttgacacaagtgacagcgaactgagc
ccacaggaaaggagaacaatggactccattgtcatggcaagcacctacccgttgtccatc
gtgctggttggggttggggatggcccctgggaggacatgcagaagttcgacgacaagctc
ccggcacgcgatttcgacaacttccagttcgtgaacttcacatcgatcatggcgaggagc
acgacgccgcagcagaaggagtcggcgttcgcgctcgcggcgctcatggaggtgcccatc
cagtacagggccaccgtggagctgggcatcctgggccgatcgacggggaagaccaagaga
gttgtgcccgcgccaccgccgctgccgcatgcgcagaggcagccgtcgttgaggagggga
gacagcaacgttagcgccggagcggcgcagcctgcagcgccaagagatgatcaggtgtgc
ccaatctgcctgactaatgccaaggatctagcatttggctgtggccatatgagctgcagg
gaatgtggggagaacctcaccagatgcccgatatgtcgacaggcgatacggtcgaagctg
aggctattctccggatga
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