Phragmites australis (common reed): 133896403
Help
Entry
133896403 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133896403
KO
K13210
far upstream element-binding protein
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133896403
03041 Spliceosome [BR:
paua03041
]
133896403
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
133896403
Spliceosome [BR:
paua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
133896403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
KH_NusA_2nd
KH_SLS1_1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
133896403
NCBI-ProteinID:
XP_062192982
LinkDB
All DBs
Position
16:816755..822166
Genome browser
AA seq
674 aa
AA seq
DB search
MADSDVAPPPPEVAPQEQSLAVESAPAEQEAAPEGEGDHKRKLEEVDAGAEENGAGGDAK
RPRADGEPDAAGVEQDNEPSVKVEEPAAADDSKVAPAEGAADAENGEAAPGTDSLVGSDE
KPIESTPEAAAEAPQQEGDASSAAQETSRKIEVPNSKVGVLIGKAGETIRNLQTSSGAKI
QITKDVDVDSNALTRSVELVGTLESIDKAEQLIKSVIAEAEAGGSPALIARGFGSGQSGS
EQFEMTVPDNKVGLIIGKGGETIKSLQTRSGARIQLIPQHPPEGVTLTERTVRVTGSKKQ
IEVAKDMIKEAMNQTFSRHATQSGGFGQQNYRPQGHGAASQWAPRSQSQPGYGYPPRGMP
PPQNYNQPYGGYPQQPPPRGGMGWDQRQGPPPHSSHQGGGYDYYKQGSQPYDSQPPSYPP
GPGNYNSYGPSQAPSYGQPQYPQPAPQQNYGHGYGDPRYNAPVPNQQYYGQPPMGPQQGY
PQQPDPYARPAYSGPGQWPPRGAPVADGTYQAPPPTSYGPPSQQPPAYNQTYGATTGPDG
YAQQGYPQQVGQAPAPYGQSAPAAPGYPQQGAQQGGYAQYPPTQPAYGDQAAQTNANYGY
QGAPADPNYGSAYPQSGYGPTPAAGQAGYASAPAAGQPAYGQAGYTQPPTNPPSYDQSAA
PPAQSGYAAAPANP
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggcggactccgacgtagcgccgccgccgccggaagtagccccccaggagcagtccctg
gccgtagaatccgcccctgccgagcaggaggcggcccccgagggcgagggcgatcacaag
aggaagctcgaggaggtcgatgccggcgcggaggagaacggcgccggcggggacgccaag
cgtccgcgcgcggacggcgagcccgatgccgcaggggttgagcaggacaatgagccatct
gtgaaggtggaggagccagcggctgcggatgacagcaaggttgctccagcggagggggcg
gcggatgctgagaatggtgaggccgctcctggtacggattcgctggtgggttctgatgag
aagccgattgagtccacaccagaagcagcggctgaagctcctcagcaagaaggtgatgca
tcaagtgccgcgcaggagacttctcgtaaaatcgaagtgcccaatagcaaggtcggtgtt
ctaataggaaaagctggtgaaacaatcaggaacttgcaaacgagctcaggtgcaaagatc
caaataaccaaggatgtcgatgttgactcaaatgctctgactcggtcggttgaattagtt
ggaacccttgaaagcattgataaagctgagcagcttattaaaagtgtcatagctgaggct
gaggctggtggatcccctgctttaatagctagaggttttggaagtggacagtcaggatca
gagcagtttgagatgacagttcctgataacaaggttggtctgattattggaaaaggcggt
gagacaattaaaagtctgcaaacaagatccggtgctcgtattcagttgattccccaacat
cctccggagggtgttacattgactgaaagaactgtacgtgttactgggagtaagaagcag
atcgaagttgcaaaagacatgatcaaggaagctatgaatcagacattttcgaggcatgca
acccaatctggtggatttggtcagcagaattaccgccctcagggtcatggtgcagcttct
cagtgggcacctcgttctcaatctcagcctggctatggatacccaccaagaggtatgcct
ccacctcagaactacaaccaaccctacggtggctacccgcagcagccaccaccaagaggt
ggcatgggctgggaccagaggcagggccctccaccccattcttcccatcagggtggcggt
tatgactactacaagcagggatctcaaccatatgatagccagccaccaagctaccctcct
ggaccagggaactacaacagttatgggccatcgcaggctcctagttatggacaacctcag
tatccacaacctgcacctcaacagaactatggccatggatatggtgatcctagatacaat
gctccggtgccaaaccagcagtactatgggcagccaccaatgggaccccagcaaggctat
cctcaacagccagatccttatgctaggcctgcatacagtggacctggacaatggccgccc
agaggtgcaccagtcgcagatggcacgtaccaggcaccgcctcctacatcttacgggcca
ccatctcagcagcctcctgcttataatcagacatatggcgcaacgactggacctgatggg
tatgctcaacagggttacccacagcaggttgggcaagcgcccgctccatatggtcagagt
gcaccagcagcaccaggttatcctcagcaaggcgcacaacaaggtggctatgctcagtac
ccgccaacccaaccagcatatggtgatcaagcagcccaaaccaatgcgaactacgggtac
cagggagctcctgctgatcccaactatggaagtgcctacccacagtcaggatatggtcct
actccggcagctggtcaggctggttatgcttctgcaccagcagccggccagcctgcttat
ggtcaggcaggatacacccagccacctacaaatccgcccagttatgatcaatctgcagca
ccaccggctcagagtgggtatgctgcagcccccgcaaatccatag
DBGET
integrated database retrieval system
