Phragmites australis (common reed): 133896573
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Entry
133896573 CDS
T10575
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1-like isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
paua Phragmites australis (common reed)
Pathway
paua03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133896573
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paua01002
]
133896573
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133896573
Enzymes [BR:
paua01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133896573
Peptidases and inhibitors [BR:
paua01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133896573
Ubiquitin system [BR:
paua04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133896573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
133896573
NCBI-ProteinID:
XP_062193154
LinkDB
All DBs
Position
17:4315634..4323132
Genome browser
AA seq
1115 aa
AA seq
DB search
MSTVSGTRHAPRRQSQDGSDDKVVVNLEASTLAVGSHRGVSTAVADARTSPTDVEAIEDE
VQAVSPSLVPPQRSNRKTRRQPVTVNLPAGSSDSQSGDTASQDASHSTEEATVSARGREQ
CGHYDHDTAHLDKVLLEILSSKHVVSCEHCREDAPRKKGSAGSKEKGSKKQKKKGGGARG
AAAKVQVKVAKSDMWVCLDCGRHFCGGAGADTKPYGHARRHAKQDRHWWAAKYDDPTVAY
CLSCEKEVSIEMPKLETVVAVTKNDKMVRTVDSDASALVNCHGNVIKGLPNLGNTCFFNA
VLQNLLALDRLRRKMLGPDVPTGSLAMSLKKLFVETSASNDAGGALSPKNLFSNICSKYP
QFRGYQMQDSHELLRCFLDGLRTEEAEAQKLAEDDSNAGVPTIVDSIFGGQLSSTVSSTE
CSHNSVKHDQFLDLSLPVPSRRPLAKSVSSPPAKRTKQSIRDRNKNRRYGTISARVSHTV
EESNKEKIQTVAECNDSQIPSSESGQVVSEKEHEPSECSESCASVCNQELKVTSNVEDNM
SWLDYVADAGEAKSEILDSADSADAGHIWGSKDAIHDSFHPQDDALPKEQILGSEHSGEN
TLDHATSLQPVILLPYKDTTKELDETEESSQNSGHATLPPAVSRVAENDTQPASGGDVEQ
DDYVGLGDMFNEPEVIFDVEKGSGKAEDIDVMAWSSNSADDEVDDSNAPVSVEGCLALYT
EPELLSEPWYCEHCTNAARPNINERKSIVEMIDSVNKRKESEETMPGGDEEQDGEKLVMS
CNKKEDVDQFVATDGCNVHSDMHCKEGEYANALLAEPEQISYGNFPDTGNTTVHKTGVVL
TVDKTEQSNSSVYHQEQCKDLNSSELECTSLSKQSHDSAIQQNDGCNVDITAEATSAPPS
GGDNDSVTCSVTNNIKSECDGGAEEVVANSLPSDARRILPNAKDIEDVNTRNQGRRKRMK
MVGKAHQVKDNQNKQKEDEIKVFRAALRRILISKAPPALTINLNRFSQDSHGRFKKLKGH
VRFKEMLDIRPFMDPRSKENDNTTYRLVGVVEHMGSMTGGHYIAYVRAGKIGGRQQQSSS
TKSWFYASDGQVREASLQEVLNCEAYLLFYERVGD
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagtcagtggcacaaggcatgccccgaggagacagtcacaagatgggtctgat
gataaagtagttgtgaacttggaagcaagcaccctagcagtagggagccatcgtggagta
tcgaccgctgttgctgatgcacgcacctcacctactgatgtggaagccatcgaagatgaa
gtgcaggcagtatcgccctcgctagtgccccctcaaaggagtaacaggaagactaggagg
caacctgtaacagttaacctgccggccggatcctcagattctcaatctggtgatacggca
tcacaagacgcaagccactcgacggaggaagcgactgtgtcagcccgtggcagggagcag
tgcggtcactacgaccatgacactgcccacttggacaaggtcctcctggagatcttgtct
tccaaacatgttgtgtcgtgtgagcattgccgggaggacgccccaagaaagaaaggcagt
gcgggaagtaaggagaaaggcagtaagaagcagaagaaaaaaggtggtggcgcaagaggc
gcagctgccaaggtgcaggtaaaggtggcgaagagcgatatgtgggtctgcttggactgt
ggtcggcatttttgtggtggtgcaggagctgacaccaagccatatggtcatgctagaagg
catgccaagcaggaccgacattggtgggctgcaaagtatgatgatccaaccgttgcatat
tgtttgtcatgtgaaaaggaggtgtcaattgagatgcctaaattagaaacagttgtagca
gtgacaaagaatgataagatggttcgtacagtggatagtgatgcatcggctttagttaat
tgccatggtaatgttattaaagggcttccaaatcttggaaacacatgcttcttcaatgca
gtgctgcagaatctccttgcgcttgataggttgcgcaggaagatgttaggaccagatgtt
ccgacagggtcccttgctatgtctctgaagaagctctttgtagagacaagtgcttcaaat
gatgctggaggtgcacttagcccaaagaacctcttctcaaatatttgctcaaaatacccg
caattcaggggctatcagatgcaagatagccatgaattactccgttgctttcttgatggt
ttacgtacagaggaagctgaagcacagaagctagcagaggatgattccaatgcaggggtt
cctacaattgtcgactccatctttgggggccaactgtctagtactgtgtctagcacagaa
tgctctcacaattccgttaaacatgaccagttccttgatctgtcactaccagttccgtca
aggaggcctctggccaagagtgtttcatcaccaccagcaaagaggaccaagcaatccata
cgagataggaacaaaaatcgcagatatgggacgatttctgctcgagtatctcatactgta
gaggagagtaacaaagaaaagattcaaacagttgctgagtgcaatgattcccaaattcct
agttcagaatcgggacaggtagtcagcgagaaagaacatgagccctcggaatgcagtgag
tcatgtgcttctgtgtgtaatcaagaactaaaggtcacttcaaatgtggaggataacatg
agctggttggattatgttgccgatgcaggtgaagcaaagtctgagattcttgattctgca
gattctgctgatgcaggacatatttggggaagtaaggatgccatacatgattcatttcat
cctcaggatgatgccttacccaaagagcagatcttgggttctgagcactccggtgagaac
actcttgaccatgccacctcattacagcctgttatcttgcttccttacaaagacaccacc
aaagaattggatgaaactgaagaaagttcacagaattcaggacatgcaactctccctcca
gctgtctctcgagtagcagaaaatgatacacaacctgcatctggtggagatgtagagcaa
gatgactatgttggtcttggtgatatgttcaatgaacctgaagttatttttgatgtcgag
aaaggaagcggtaaagctgaagatattgatgtgatggcttggagtagcaatagtgctgat
gatgaggtggatgatagtaatgctcccgtatcagttgagggttgcttggctttgtatact
gaaccagagctgctgtctgaaccatggtactgtgagcactgtactaatgcagcgcgccca
aacattaatgaaagaaaaagtattgtggagatgattgatagtgtcaataaaagaaaggag
agtgaggagacaatgccaggtggtgatgaagaacaagatggtgagaagttggtcatgagc
tgcaacaaaaaggaggacgttgaccagtttgtggcaactgatggttgcaatgtacattca
gatatgcactgcaaggaaggtgagtacgcaaatgctttgttggctgagcctgaacagatc
tcctatggtaattttccagacactggaaatacgactgtacataaaacaggtgttgtgtta
actgttgacaagaccgagcagtcaaacagtagtgtttaccatcaggaacagtgtaaagat
ttgaacagctcagaattggaatgcacatctttgagtaagcaatcacatgattcagctatc
caacaaaatgatggatgtaatgtggatataactgctgaagcaacaagtgcaccacctagt
ggtggtgataatgattcagttacttgcagtgtaactaacaatataaaatctgaatgtgat
ggtggtgctgaagaagttgtggctaacagccttccgtctgatgcacgaagaatcttgccg
aatgcgaaagatattgaagatgtcaacacaaggaatcagggcaggaggaaacgaatgaag
atggttggtaaggcacatcaagtgaaagataaccaaaataagcagaaagaggatgaaata
aaggttttcagagctgcactgagaagaatccttataagcaaggctccgcctgcattgacg
attaatttgaacagattcagccaggactctcatggccggtttaagaaattgaaagggcat
gtgcgctttaaggaaatgcttgatatacgaccattcatggacccaagatctaaggagaat
gacaacaccacttatcgtctagttggcgttgtagagcacatgggatccatgacaggaggt
cactatattgcatatgtgagagctggcaagatcgggggtcggcagcagcagagcagtagc
actaagtcttggttttacgcaagcgatggacaagtcagagaagcctctctgcaggaagtt
cttaactgcgaggcttacttacttttttacgaaagggtgggagactaa
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