Phragmites australis (common reed): 133896574
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Entry
133896574 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133896574
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133896574
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133896574
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133896574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_10
RING_XB3-XBAT31
zf-rbx1
TRAF3_RING
zf-RING_6
LCE6A
FYVE
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
133896574
NCBI-ProteinID:
XP_062193157
LinkDB
All DBs
Position
17:4322092..4324428
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AA seq
98 aa
AA seq
DB search
MVVPVVHCLSPDRGEGSSLQSNSAMQTGKEPAKEAPKEPIFTFPICWNNLKEPSTTICGH
IFCAGCIKQAIKVQKKCTTCRSLRANNFHGIYLPNSGS
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggttgtacctgtagtacattgcctctccccagataggggagaagggtccagcttgcag
tcaaatagtgcaatgcaaactggcaaagagcctgcgaaagaggctcccaaggaaccaatt
tttaccttcccaatatgttggaacaatttgaaggagccttccacgacaatttgtggccat
atcttctgtgcggggtgcatcaagcaagccatcaaggttcagaagaaatgtacaacttgc
aggagcctgagagcaaacaatttccacggcatttaccttcctaactctggtagttaa
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