Phragmites australis (common reed): 133896794
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Entry
133896794 CDS
T10575
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
paua Phragmites australis (common reed)
Pathway
paua03015
mRNA surveillance pathway
paua04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133896794
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133896794
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
paua01009
]
133896794
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133896794
03036 Chromosome and associated proteins [BR:
paua03036
]
133896794
Protein phosphatases and associated proteins [BR:
paua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
133896794
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
133896794
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
133896794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EF3_N
HEAT_EZ
PDS5
Htt_N-HEAT_1
Vac14_Fab1_bd
TOR1L1_N
Cnd1
CLASP_N
TAF6_C
TPR_TNPO3_IPO13_3rd
CEP104-like_TOG
DUF3102
Motif
Other DBs
NCBI-GeneID:
133896794
NCBI-ProteinID:
XP_062193413
LinkDB
All DBs
Position
17:complement(6830352..6838675)
Genome browser
AA seq
587 aa
AA seq
DB search
MAMMDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDE
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGAQMKES
DIVDWFIPVVKRLAAGEWFTARVSSCGLFHIAYPSAPDQLKTELRTIYGQLCQDDMPMVR
RAAASNLGKFAATVEQSHLKTEIMSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPLDCVV
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRADLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPQIAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLEDKVFSIRDAAANNLKRLAEEFGPEWAMQHIIPQV
LEKINNPHYLYRMTILQAISLLAPVMGAEVTCQKLLPVVINSSKDRVPNIKFNVAKVLRS
LIPILDQSVVEKTVKPCLVELSEDPDVDVRFYANQALQACDQMMVSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggccatgatggatgagcctctgtatccaatcgctgttctgattgatgagctgaagaac
gaagatattcaattgcgtctgaattccatcagaagactttccacaattgcacgggcactt
ggggaagaaagaaccaggaaggagctaattccttttctcagtgaaaacaatgacgatgaa
gacgaggtgcttcttgcaatggctgaggaattaggtgtgttcattccgtatgttgggggt
gtagaacatgctcatgttttacttccaccattggagacattgtgtacggtggaggaaact
tgtgtccgcgacaaggcagtcgaatctctgtgccgtattggggcacagatgaaagaaagt
gacatcgtcgattggttcattccagttgtaaagaggctagcagctggtgagtggtttacc
gctcgggtatcttcctgtggcctattccacatagcctatccaagtgcacctgaccaattg
aaaacagaattaaggactatctatggccagttatgtcaggatgacatgcctatggtcaga
agagcagctgcatcaaaccttggaaagtttgcagccacagttgaacagagtcatctgaag
acagaaataatgtcaatatttgatgacttgacccaagatgatcaagattcagtgcgtttg
ttggctgttgaaggttgtgctgctcttggaaaattgttggagccgctagattgtgtagta
catattctcccagtcattgtgaatttctcccaggataaatcctggcgtgttcgttatatg
gttgccaatcaattgtatgagctctgtgaggctgttggccctgagcctacaagagctgac
ttggtgcctgcatatgttcgtctccttcgtgataatgaggctgaagtgcggatagcagct
gctggaaaagtcactaaattctgtcgtatattaaatccacagattgcaatccaacatatt
cttccatgtgttaaggaattgtcatcggattcgtcccagcatgttcgttcagctttggct
tcagtcattatgggaatggctcctgtcttgggaaaggatgctaccattgagcaacttctt
cctatttttctatctttgcttaaggatgaattccctgatgttcgactcaacataatcagc
aaacttgatcaagttaatcaggttattggaattgacttgctatcgcaatcactgctacca
gccattgtagaactcgcagaggataggcactggagagtccggcttgcaataattgagtac
atcccgttgttggcgagtcagttaggtgttggattttttgatgacaagctgggggccctc
tgcatgcaatggttggaagataaggttttctccatcagagatgctgcagctaacaacttg
aagcgccttgcagaggagtttggtccagagtgggcaatgcagcatataattcctcaggtg
ctggagaagataaacaatccgcactacctgtatcgcatgacgattctgcaagcaatctca
ttgttggcccctgtcatgggtgctgaagtcacttgtcaaaagctgcttccagtcgtcata
aattcctcaaaggacagggttcctaacatcaagttcaatgttgcaaaagtattgcggtcg
cttataccaatcctcgatcaatctgttgtggagaagaccgtgaaaccctgcctcgttgag
ctcagcgaggaccctgatgtggatgtaagattctacgcaaaccaggcactgcaggcatgc
gatcaaatgatggtatcgagctaa
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