Phragmites australis (common reed): 133896824
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Entry
133896824 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133896824
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133896824
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133896824
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133896824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-rbx1
zf-RING_10
RING_XB3-XBAT31
zf-RING_4
Prok-RING_4
Zn_ribbon_6
zf-RING_6
Rad50_zn_hook
zf-ANAPC11
Sina_RING
zf-P11
zf-Nse
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
133896824
NCBI-ProteinID:
XP_062193455
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Position
17:complement(26108038..26110812)
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AA seq
199 aa
AA seq
DB search
MSTVSGTRRTPRRQSQDGSADKVVVNLEAISPSVGSRRGVPTAVAGACTSPIDVDAIEDE
VQAVSPSRVPPQRRNKRTRRQPVTVVDLEVDASREGYKRQRVVPVVHRLSPDRGEGSSMQ
SNNVVQTGKEPAKEAPKEPIFTCPVCWNNLDEPSTTICGHIFCAGCIKQAIKVQKKCPTC
RRSLRANNFHRIYLPNSGS
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagtcagtggcacaaggcgtaccccgaggagacagtcacaagatgggtctgct
gataaagtggttgtgaacttggaggcaatctccccatcagtggggagccgtcgtggagta
ccgactgctgttgctggcgcatgcacctcacctattgatgtggatgccatagaagatgaa
gtgcaggcagtatcgccctcgcgagtgccccctcaaaggaggaacaagaggaccaggagg
caacctgtaacagtggttgacttggaggtagatgctagccgggaaggttacaagcgtcag
agggttgtacctgtagtacatcgcctctctccagataggggagaaggttccagcatgcag
tcaaataatgtagtgcaaactggcaaagagcctgctaaagaggctcccaaggaaccaatt
tttacctgcccagtatgttggaacaatttggatgagccttccacgacaatttgtggccat
atcttctgtgcggggtgcatcaagcaagccatcaaggttcagaagaaatgtccaacttgc
aggaggagcctgagagcaaacaatttccaccgtatttaccttcctaactctggtagttaa
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