Phragmites australis (common reed): 133896895
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Entry
133896895 CDS
T10575
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
paua Phragmites australis (common reed)
Pathway
paua03440
Homologous recombination
paua03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133896895
03460 Fanconi anemia pathway
133896895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133896895
03036 Chromosome and associated proteins [BR:
paua03036
]
133896895
03400 DNA repair and recombination proteins [BR:
paua03400
]
133896895
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
133896895
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
133896895
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
133896895
FA (Fanconi anemia) pathway
Downstream FA components
133896895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
BRCA-2_OB3
Motif
Other DBs
NCBI-GeneID:
133896895
NCBI-ProteinID:
XP_062193519
LinkDB
All DBs
Position
2:complement(7044830..7050598)
Genome browser
AA seq
686 aa
AA seq
DB search
MKTNKLSSAGESKLPSTQISPCRTKLSARYPFQHQRKTYKEYFGGPPCFKYSTEHVLDDV
KLMDAKRAERYKFQHTGTGAEEFQKMLLACGASLSYASKEWVSNHYKWIVWKLASLERCY
PTRTAGQFLTVANVFEELKYRYDREVNHGHRSAIKKVLEGNASPSLMMVLCISAIYSCPN
LNNNKLEVDKADTNEDSNDNKSLPAANRNMSVKIELTDGWYPLDASLDTALSEQLEKRKL
FLGQKLRIWGASLCGWSGPVSFHEASGSAKLMVHINGTYRARWNETLGFCKHVGLPLAFK
CIKASGGRVPKTLVGVTRIYPVLYRERLPDGRSVVRSERMERKALTLHQQSVSKIAEDIL
FEQQENCDSTDDNEEGAKFCKMLERAAEPDVIIAGMTSEQLMHLSSYKEKRKVVMQNEVA
KKVEKALEVANLSSRDVTPFLKVRVMGLVSKLSASKASSKEGLITIWNPTEMQKADLVEG
QIYSVTGLVPSNYCTETLYLHARGSSTTWRRLSSSQTTDFKSFFSPRKAIELSKFGEVPL
SSEFDIAGVILYVGNIYLCSNQKRQWLFLTDGSKFISEQKSEERDCLLAVSFSCPTTGED
SALFSYALSGSIVGFSNLVKRQKDQMRQIWVAEATESSTYTLSHEIPKKSHLKEAATSAE
RWASISYPKIQELKERVLCIVGDSGV
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactaacaaactgtcctctgctggagaatccaaactaccatcaactcagatcagt
ccctgtaggacaaagctatctgcacgttatcctttccaacatcaaaggaaaacttataaa
gaatattttggtggtcctccttgcttcaaatattcgactgaacatgtattagatgatgtg
aagctcatggatgcaaaaagagctgagaggtacaagtttcagcatacgggtactggggct
gaagagtttcagaagatgctgctcgcgtgtggtgcttcattgtcatatgcatctaaagaa
tgggtcagtaaccactataaatggattgtgtggaaacttgcttcactcgaaagatgctac
ccaactagaactgctggtcagttcttgactgttgccaacgtttttgaggagctgaagtac
cggtatgacagagaagtgaaccatggccatcggtcagcaataaagaaagttttagaaggg
aatgcttcaccatctttgatgatggtcctgtgcatttcagctatttactcttgtcctaac
ctaaataacaataagttggaggttgacaaggcagatactaatgaagacagcaatgacaat
aaaagcttgccagctgctaatagaaacatgtctgtgaaaattgaattaactgatggatgg
tatccacttgatgcatcattagatacggcactttcagaacagctggagaaaagaaagctt
ttcttaggacagaagcttcggatatggggagcttccttatgcgggtggtctgggcctgtg
tcgttccatgaggcatctggttctgccaaattaatggtccatataaatggcacctatcgt
gcaagatggaatgagaccttgggattctgcaagcatgttggacttccactggcattcaag
tgcataaaagcttccggtggtagagttcctaagacactggttggagtcacaaggatatat
cctgttctgtacagggaaaggttgcctgatggtcgctctgttgtgagatctgaaaggatg
gaaagaaaggcactaacactgcaccagcagagtgtatctaagatcgcagaagatattctg
tttgaacaacaagaaaactgtgacagtacagatgataacgaggaaggggctaaattttgc
aaaatgctagagcgtgcagctgagcctgatgttataattgcaggcatgacttcagagcag
ttgatgcatttgtcatcttataaagaaaaacgaaaggtggttatgcaaaatgaagtagct
aagaaggttgaaaaggccctcgaagtagctaaccttagttcaagagatgttacaccattt
ttgaaagtgagggtgatgggccttgtcagtaaactttctgcttcaaaagccagtagcaag
gaagggctaataacaatttggaaccctactgagatgcagaaagctgatcttgtggaggga
caaatttattctgttacgggattggtgccttcgaactattgtactgaaaccctctacttg
catgctagaggatcatctacgacatggaggcgcttatcatcatctcagaccacagatttt
aaatcatttttcagccctcgtaaagcaattgaactgtcaaagtttggtgaggtgccgctt
tcaagtgaatttgacattgcaggtgttattttgtatgttggcaatatttatttatgtagc
aaccagaaaaggcagtggctctttttgacagatggatctaaatttatctctgaacaaaag
tctgaagagcgagattgtcttctagcagttagcttttcttgcccaaccactggcgaagac
tcagcattatttagttatgccctctccggaagtatagttggttttagtaatctggtcaag
cgacagaaagaccagatgaggcaaatatgggtagctgaggcaacggagagctctacctat
actctttcccatgagattcctaaaaaatcccaccttaaagaagctgccacttctgctgag
agatgggcttcaatatcttatcctaaaattcaagagctaaaagaaagggttttatgtata
gttggcgatagtggtgtctga
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