Phragmites australis (common reed): 133897127
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Entry
133897127 CDS
T10575
Name
(RefSeq) autophagy-related protein 18c-like
KO
K22991
WD repeat-containing protein 45
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133897127
Membrane trafficking [BR:
paua04131
]
Autophagy
Other autophagy associated proteins
Others
133897127
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
BCAS3_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_IFT140_2nd
Beta-prop_WDR3_1st
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
CFAP251_N
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR35_TULP_N
PEP5_VPS11_N
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_IFT80_2nd
Beta-prop_TEP1_2nd
DUF6817
Motif
Other DBs
NCBI-GeneID:
133897127
NCBI-ProteinID:
XP_062193690
LinkDB
All DBs
Position
2:7252333..7257139
Genome browser
AA seq
418 aa
AA seq
DB search
MSSQVSTSRGLHPPGKLGTFESPHSWPLSAPTSQPEAGRGDDQEVRLLSVAWNQDCGCFA
AGTSNGFRIFNCDPFKETFRRDLKSGGFGIVEMLFRCNILALVGGGSNVQYPPNKVMIWD
DHQSRCIGEFAFRSDVRAVKLGKDYIVIVLERKIYVYNFTDLKLLHQIDTLSNPKGLCCL
SHHSNTSVLACPGVHQGHVRVEHFGLKVTKMITAHDSHISCMSLTMDGLLLATASMKGTL
IRIFNTMDGTRLQEVRRGLDKAEIYSIALSPNVQWLAVSSDKGTVHIFSLRVRVAGEDAS
NEQRTLEGPRMDHQNSSSSIDPLIQTNTGSNASSSLSFMRGILPKYFSSEWSFAQFHLPE
VTRYIVAFGAQNTVMMVGLDGSFYRCSFDQVNGGQMLQKEYFHFLKADTSPPFRTPGI
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgagctcacaagtctccacatcacggggtctgcatcccccgggaaagcttgggacattc
gagtcccctcactcctggccgctgtcggcacctactagccagcccgaagcaggccgcggt
gacgaccaggaggtcaggctgttgtcagttgcttggaatcaggactgtggttgctttgct
gctggtaccagcaatggcttcaggatcttcaattgtgacccttttaaggagactttcagg
agggatctcaagagtggggggtttgggattgtcgagatgctgttccgttgcaacatcctt
gcccttgttggtggtggctccaatgtacagtatccgcctaacaaggtgatgatctgggat
gatcaccagagccgttgcattggagagtttgcctttcgctctgatgttcgggctgtaaaa
ctggggaaggactatattgtaattgttcttgagcggaagatatatgtctacaacttcacc
gatttgaagttgctccaccagattgacaccctgtcaaatcccaaaggattgtgttgcctc
tcccatcattccaatacttcagtgctggcctgccctggggtgcaccaggggcatgttcgt
gtagagcattttgggctgaaggtgacaaagatgattacggctcatgattcacacatttct
tgcatgtccttaactatggatggtctcctactggcaacagcaagcatgaagggcactttg
atcagaatattcaacacaatggatggcactcgcttacaagaggtacgcagagggcttgac
aaggcagaaatctatagcattgcactatcacccaatgtgcagtggttggcagtgtccagt
gacaagggaactgttcatattttttctttgagagtcagagttgctggggaggatgcaagc
aatgagcaacgcactcttgaaggtccacgaatggatcaccagaactcttccagttctatt
gatcctcttattcaaacgaacactggatccaatgcgagttcatcattgtctttcatgaga
ggtattctgccaaaatatttcagttcagagtggtcatttgctcagttccatttaccagaa
gtcacacgctacatagtagcctttggtgctcagaacactgtaatgatggttggcctggat
ggcagcttctataggtgcagcttcgaccaagttaatggagggcagatgttgcagaaggaa
tactttcattttctgaaggccgacacaagcccacccttcaggaccccaggcatctga
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integrated database retrieval system
