Phragmites australis (common reed): 133897155
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Entry
133897155 CDS
T10575
Name
(RefSeq) meiosis-specific protein PAIR2-like
KO
K12778
meiosis-specific protein
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
paua03036
]
133897155
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
133897155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC84
HORMA
VPS53_C
Motif
Other DBs
NCBI-GeneID:
133897155
NCBI-ProteinID:
XP_062193750
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All DBs
Position
17:26189590..26203122
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AA seq
1067 aa
AA seq
DB search
MVMAQKTKEAEITEQDSLLLTRNLLRIAIYNISYIRGLFPEKYFNDKSVPALEMKIKKLM
PMDDESRRLIDWMEKGVYDALQKKYLKTLLFCICEEEGPMIEEYAFSFSYPNTSTEEVEM
NMSRTGSKKSSTTFKSNAAEVTPDQMRSSACKMIRTLVSLMRTLDEMPEERTILMKLLYY
DDVTPEDYEPPYFKFCADNEAINIWNKNPLKMEVGNVNSKHLVLALKVKSVLDPCDDNNV
NSGDDGMSLDNESDQDDDFSDTEVRPSEADRYIVAPNDGNCKGQNTGTISEDDTQDAAHE
EELAAQVREWICSRDIGTINVSDVASNFPDISMELVEDIMVKLLKYGVLSRASKDGYTVN
KAADPRTPHIKKEVMQNVSPTEGTKTNGGDLMYMKALYHALPMNYVTIAKLQGKLDGEAS
QNTVRKLIEKMVQDGYVKNSTNRRLGKAVIHSEATNRKLLEIKKILEGSGAEQMVIDTNA
EHAEIGRKDVLSGHEMRDGSTMGCLHSIGSDLTRTRELPELQQNVSMQSGQDAPAMDKDP
SRTPTSLREPAAPVCSLESGVLGQRIRKSLTGAVEMQSTQDKRSRKASMVKEPILQYGRR
HRYFPAHRAALAATLSRFRSKLSDLRCAFLGATSPPRRPGLWCPFCSTDLVDLDSRSSCS
NAIYHLASDEHLKGVKDFLWKHRGGTDQADSLRISEDELAKWEKGCESLSTGAKKGTQGL
VGASLGLMKDIQNESTSDNLDSFAKTNIPSFSNSASYVVTPLQSPTNGAYHPISTACHGA
SGSGSVLYSAPHGTVGLPITPWGLAAAHEQQGVLTTNWSHSTDPEMEGHQSTIIRNGPNP
SISCSVHIQQNHSGGYLNNGSKANVHTGAPPPWLEASEHDPKSLSLSKCSLPSSRKGKSR
KLNPKRVGAAWAERRRAEMEMQKRGEIVPETSDSSWLPNFGGVWQSGTRKESKKEFEKNH
KLHDRKGNHELSLEIKPYISKRMMDVMCLCRRAARAQPIASMSAHGWKVIYGLTMRNPKQ
ILIREALFLAMMYCPQPRSSRERGGSSQWASSRVGSLTLDVCIGACH
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggctcagaagacgaaggaggcagagatcacggaacaggattcgctgcttcta
acaaggaacttgctccggattgccatatacaacatcagctacatcagaggcctattccct
gagaagtacttcaatgacaagtcggttccggcactagagatgaagattaagaagctgatg
ccgatggatgatgaatcgaggaggctgatcgattggatggagaaaggtgtctacgacgca
ttacaaaagaagtatctcaagacccttctcttttgtatctgtgaggaggaaggccctatg
attgaggagtatgccttctcatttagctaccccaacactagtactgaggaagttgagatg
aacatgagccgcacagggagcaaaaagagcagcactacattcaagtcaaatgctgcagaa
gtaactcctgatcagatgaggagctctgcttgcaagatgatcagaacgctggtttcactt
atgaggaccttggacgaaatgccagaggagcgaaccattctgatgaaactgctgtactat
gatgatgtcacgcctgaggattatgagcctccttattttaagttttgtgctgacaatgag
gccataaatatatggaacaagaaccccttgaagatggaagtagggaatgtcaacagcaag
catcttgtgctagctttgaaggtcaagagtgtccttgacccatgcgatgataacaatgtt
aatagtggagatgatggcatgagcttggataatgagtctgaccaagatgatgacttttct
gacactgaggttcggccatctgaagcagaccgttacattgttgctcctaatgatggaaat
tgcaaaggacaaaatactggtacaatctcagaagatgatactcaggatgctgctcatgaa
gaagaacttgctgcccaagtaagagagtggatatgctcaagagacattggaactattaat
gtttcagatgttgcttctaacttccctgacatatcaatggaattggttgaagatattatg
gtgaagctacttaaatatggtgtactatccagggcaagcaaggatggttatactgttaac
aaggctgctgatcccagaacaccacatataaagaaagaggtcatgcaaaatgtgtcacct
actgaaggaaccaaaaccaacggtggtgatttaatgtatatgaaggcattgtaccatgca
cttcccatgaattatgtgacaatagctaaacttcaaggcaagctggatggagaagccagc
cagaatacggtccgaaagttaattgaaaaaatggtgcaagacggatatgtgaagaattca
accaaccgaagattgggcaaagctgtcattcattctgaagccactaacagaaagctcctt
gagataaaaaagatactggaaggcagtggagccgaacaaatggtcatcgataccaatgca
gagcacgctgagattgggcgcaaagacgttctgagtggccatgaaatgagagatggctcc
acaatgggttgcctccactcaatcggatctgaccttacccgtactcgggagctaccagag
ctgcagcagaatgtatccatgcagagcgggcaagacgctccggcaatggataaggatccg
agcaggacccctacaagtttgcgcgagccagctgcacctgtttgttccctggagagtgga
gtgcttggacagagaatcagaaagtccctaaccggtgccgttgagatgcaatctacacag
gacaagagatccaggaaggctagcatggtgaaggagccgatactccagtatggccgccgc
caccgctacttccccgcgcaccgggccgcgctcgccgccacgctctcccgcttccgctcc
aagctctccgacctccgctgcgccttcctcggcgccacctccccgccgcggcggcctggc
ctgtggtgccccttctgctccacggacctcgtcgacctcgacagccgctcctcttgtagc
aatgcgatttaccatctggcaagcgatgagcacctgaagggcgtgaaggatttcctgtgg
aagcaccggggagggacggatcaggcggattcacttaggatttcagaggacgagcttgct
aagtgggaaaaaggctgtgaatccttgagtacaggagcaaagaaagggactcaaggtctg
gttggagcatctctggggctgatgaaagatatccaaaatgaatctacctctgacaatttg
gatagttttgcaaaaaccaatataccatcttttagtaattctgcatcttatgttgttacg
cctttacaaagtcctaccaatggggcatatcaccctattagtacagcgtgtcatggagct
tccggttctggaagtgttctttattctgctccacatggaactgttgggctgcccatcaca
ccttggggattggccgcagcacatgagcagcagggtgtgctgaccacaaactggtcccat
agtactgatcctgaaatggaaggtcatcaatctactatcatcagaaatggcccaaacccg
tcaatttcttgttctgtacatattcaacaaaaccactctggaggatatttgaacaatggt
tcaaaagcaaatgtgcatactggtgctcctcctccttggttagaagctagcgagcatgat
ccaaagagtttgtcactcagcaaatgtagtcttccttcttctcggaaagggaaatcaagg
aaactcaacccaaagcgggttggtgctgcatgggcagaaagaagaagagctgaaatggaa
atgcagaagcgaggcgaaattgttccagaaacatctgattctagttggctccctaatttt
ggtggcgtctggcaatctggcacaagaaaggaatcaaagaaagaatttgagaaaaaccat
aagcttcatgacaggaagggtaaccatgagttatccttggagataaaaccatatatcagc
aaacggatgatggatgtcatgtgtctgtgcagaagagctgctagggcacagccgatcgct
tccatgtctgcccatggctggaaggtcatatacgggctgactatgcggaatcctaagcag
atattgataagagaggcactatttctcgccatgatgtattgtcctcaacccagaagttca
cgcgagcgcggtggttcctcgcagtgggcgagtagccgggttgggagtttgactctcgac
gtttgtatcggggcttgtcattag
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