Phragmites australis (common reed): 133897166 Help Entry 133897166         CDS       T10575                                  Name (RefSeq) protein RST1 isoform X1   KO K27498   focadhesin Organism paua  Phragmites australis (common reed) Brite Messenger RNA biogenesis [BR:paua03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      133897166 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Other DBs NCBI-GeneID:  133897166 NCBI-ProteinID:  XP_062193768 LinkDB All DBs Position 2:complement(7384177..7402897) Genome browser AA seq 1830 aa AA seqDB search MASSAAAAAAFSHLVDRTRVPDPTLQGHAVAAFFRHLLSLPAPLPAAAHDAASALLASPH PSVAAHAAASLARLAASRADLLPPGLALPLLLAPLAASPSPRLASCLVKAVTALASCVLR SGSRFPPHDHPFVQALASGADGARAELTRQAARMVAEGLDGVVGFLRPFLMFAVVRKGDA PFAKDLIGTLAAAGAAAGKPGVAIPVLKLLEESLLHFGRGDGEEVRLWLGSAECLVDAYV VLLRKLAHAQMPTYDAQASSAKLMETLLSQCSFHQKLLGITSTVLGLSKYLFSVQKDLGL FYLPEISVVLSSLSHSLSGLEFEHEQLAGLKLLAFLMEWKYENVLERKELTQHLNEELLC VLPVINLAISPSKSVKAVASHVLSRFSLLVLDLPASHSSEHQDISMVCHISKPAFILPKL LNHLWSQPSSSGFIFMKYIASKVSPDSARNYLEASYWTHQINDYLTALRRDKLTLDGLSS KKTSSVAISSLVSSVVSVLVMHPKLGTSAAQSLAVLGASDPRLGMPLFVIILFYIKILYS NSNCSTKISLSLLESLPSLATHGFVLPLALQWISPMLKRNTSLVLYAIAVRLLCKIWIVT DWAFPNLQVILDPENFSNFISDREISTSIAASIRDVCKQNPDRGVDLILSVSFCIESRDS VVQALGLESLLYLCEADVVDFYTAWKVISKELLDYSVEPIVAHSLCALLRWGAMDAEAYS GISNNLIGILWSIGTSKKNNSEPLWVKARGTAFHSLSYYKVSLIQDAIPDFWKQNYEFFT NEYNLAVLKAMENFQDEIVKFEHLNRRRVTTDKRAAVHKFEKLLDVFPQAVFKGKTAHHQ LPGAALLTLNFAPKDLLNVNEGKSKQDLPRVHAAYEQAFAEMAESMYISRNIEVALLALH SWKSFVSNWMQAVVALLDIKESLKLSKASKAANDIFKILCDRVPLSTPQVAVNIALVIGA LCLIVPSTAHLVISSASDFLLKWLFQYEHEHQQWSAALSLGLIFNCFHPTDKKSKFQVIN GLLEVITKTKSCLVKGACGLALGYACQGLLARAHNVADSEIEATTQLNERASVEDILHTL VTSLIQLCPSSCYSLKKLSICGIGSMGGMEENNNNFDDDPWAVAGLVLGLGKSAVALYRL GAYEAVNDVKNILISWIPDVDSSSALFDERNSVSLCMGSCLALPSVVTFCQRVELLDDDL DALFNRYTSLASEVLNLNNSGTIFQNLLMAICIGAGSFLSCILDDGVHAMEFIGVKNLLD TLRHIYTHPFPPLVHLGGMFGIVNAFGAGAGDLTGMCSKPMTSQIKHEESSLVRGPVLTS PVCETLSTSMIQEILLLAKDAEDKHIQYYAAWAISFLRSRWLSKNQILYDDNGSHRSSGD LSQSSCFSEQSLVWNLSLWLSDLKLEKPGDAVPVNTIGTVLKCLSKASRLPTTDWGVIVR RCMKVEAQIPLKSTNQHDPKLLREACLYFSLAHASHISPLLQFLDDLTDILRFRRLDINV QSILLQHLSHLMKLFSDSRLEKLFEDLSEYLYSSTSSYLNYSSEQRSMIRMSFWEGIYKC LVEIVSEESGGFSFIKKCIECLLPLMTLCNDGQPEFMDEWSAAIKCLTNAQKSWLSDMLQ IRNTALITEGEYVDVAIKIIIRARLCSAGCGSAPELGNIKMAILCTKTDGVWWGVLVEIA AAIYSAENSIKRQWLLDALDIGCVTAHPSTVLRFVGLLCGSCCIYMPLLVVNSTNVLSDL PVTLPSFLSSSIWDDLGNSVADRLWLLTTRIYTWAEQLAHGDDLTGNDHIHRSEAEIATF LASILRSTCIAVKDYLTVDKQLKLANLEAL NT seq 5493 nt NT seq  +upstreamnt  +downstreamnt atggcctcctccgccgccgccgcggcggctttctcccacctcgtcgaccgcacccgcgtc ccggaccccaccctgcagggccacgccgtcgcggccttcttccgccacctcctctccctg cccgcgccactccccgccgcggcccacgacgccgcctctgccctcctagcctcgccccac ccctccgttgccgcccacgccgcggcatccctcgcccgcctcgccgcctcccgcgccgac cttctccctccgggcctcgccctcccgctcctcctcgcgcccctcgcggcctccccctcg cctcggctcgcctcctgcctcgtcaaggccgtcaccgcgctcgcgtcctgcgtcctccgc tccggctcccgcttcccgccccatgaccaccccttcgtccaggcgctcgcgtcgggagcc gacggcgcgcgcgcggagcttacgcggcaggcggccaggatggtggccgaggggctcgac ggggtggtaggcttcctgaggccgttcttgatgtttgccgtcgtgaggaaaggggacgct ccctttgcgaaagatttgatcggcactctggccgcagcgggcgctgcagcagggaagccg ggtgtcgcgatcccggtgctgaagttgctcgaagagagcttgctgcatttcggccgcggg gatggtgaggaagtgcggctctggcttggttctgcagagtgcttggtggatgcttacgtg gtgttattgaggaagttagctcatgctcaaatgccaacatatgatgctcaagcaagtagt gcaaagttgatggaaacacttctatcacaatgttcatttcatcaaaaacttctgggaatc acttctacagttcttgggttatcaaaatatttattctcggtgcaaaaggaccttggatta ttctatctacctgagatttctgttgtccttagttctctttctcactctctcagtgggctg gagtttgaacatgaacagctagctggcttgaaacttctggcctttttgatggagtggaaa tatgaaaacgtgcttgaaagaaaagaactaacacaacacctcaacgaggagcttctctgt gttctgccagttatcaaccttgctatttctccatctaaatctgtgaaagcagtggcatct catgttttgtcaaggttcagtctgcttgttttagacttgcctgcttctcattcatcagag catcaagatatttcaatggtttgccacataagcaaacctgcatttattcttcctaaactt ctaaatcatctatggtctcagccatcttcatcaggcttcatttttatgaagtacatagct agcaaggtttcacctgattctgctcgaaactatctggaagcaagttattggacacatcaa ataaatgactatctgacagcccttcgcagagacaagcttacattggatggcttgtcttca aaaaagacatcatcagtagcaatatcatcgctagtaagctctgttgtatctgttttagta atgcacccaaaacttggtacttctgctgctcagtctttggccgttcttggcgcatcagac ccgagattgggtatgccgttgtttgtaattatcctcttctatatcaagattctatacagc aacagtaattgttcaacaaagatctcgctcagtttgctggagtcattgccatcacttgct acacatggttttgtgcttccactcgctctgcaatggatatcgccaatgcttaaaaggaac acaagtctggttctatatgctatagctgttcggttgctctgcaagatatggattgtcact gactgggcatttccaaacttacaagtaattctggatcctgaaaatttttccaatttcatc tcagacagagaaatttccacaagtattgccgcatcaatacgtgatgtttgcaagcagaac ccagatagaggtgttgatctaatattatccgtctcgttttgtattgagagtcgtgattct gtggttcaagctcttggtcttgagagcctcttgtatctctgtgaagcagatgtggtcgat ttctatacggcctggaaagttatatcaaaggagctgcttgattattctgttgagcccatt gttgcacacagtttatgtgctctgttgagatggggagcgatggatgctgaggcgtattct ggaatatctaataacctaataggaatattgtggagcattggaacatctaagaaaaataat tctgaacctctctgggttaaagcaagaggaactgcttttcactccttatcctactacaag gtctcacttattcaagatgctattcctgatttctggaaacaaaactatgagttctttact aatgaatataatctggctgttctcaaggccatggagaactttcaagatgagatcgtaaag tttgagcacttaaaccgtcgtagagtgactactgataaaagagctgcagtgcataaattt gagaagctactggatgttttccctcaggctgtgtttaaagggaagacagcccatcatcaa ttgcctggtgcagctcttttaactctcaattttgctccaaaggacttacttaatgttaat gaagggaaatctaagcaggatttgcctagagttcatgctgcttatgagcaagcatttgca gagatggccgaatctatgtatatatcaagaaacatagaggtagctcttcttgcattgcat tcatggaagtcatttgtttccaattggatgcaagcagttgtagctttgcttgacattaaa gagtcgttgaagttgagcaaagcttcaaaagccgctaacgatatatttaagattctgtgc gatcgtgttccattatccactcctcaagttgctgttaacattgctcttgtaattggagca ctgtgcttgattgttccttcaactgctcatttagtaatatcttctgcatcagattttcta ttaaaatggttgtttcaatacgagcatgagcaccagcaatggtcagccgctctctctctt ggactaatattcaattgttttcatcccacggacaaaaagagcaagtttcaggttattaat gggcttcttgaggttatcacaaaaactaaaagctgtcttgtaaaaggagcttgtggactg gcattaggttatgcttgtcaaggtcttttagccagagcacataatgttgccgattcagaa atagaggctactacacaactcaatgagcgtgcatcagttgaagacattcttcacactttg gttacttcattaattcagctgtgtccatcgtcatgttattctctcaagaaacttagtatt tgtggaataggctccatgggggggatggaagaaaataacaataacttcgatgatgatcct tgggctgttgccggacttgttcttggtctgggaaaatctgctgttgctctgtatagactt ggagcttatgaagctgttaatgacgtcaagaacatattgatatcatggataccggatgtt gattcaagctctgcattatttgatgaaagaaattcagtatcactatgtatgggctcatgt cttgctcttccatctgttgtgactttttgccagagagtggagttgttggatgacgacttg gatgcactgttcaatcgttacacttctttagcttctgaggtcctgaaccttaataattcc ggaactatctttcagaatttattgatggcaatctgtatcggtgctggatctttcctgtct tgtatattggatgacggggtacatgctatggaatttattggtgttaaaaatcttctagac actctcagacatatatatacccatccttttcctcctcttgttcatttgggaggcatgttt ggcatagtcaatgcttttggtgcaggtgcaggggaccttactgggatgtgttcaaaacct atgacttcacaaatcaaacatgaggagtcatctttggtgagaggtcctgtactgacaagc cctgtttgtgagactctttcaacatcaatgattcaggaaatattacttcttgctaaggac gctgaggataagcacatacaatattatgctgcatgggccatttcatttcttagaagcagg tggttgtcaaagaatcagattctttacgatgacaatggttctcatagaagttctggtgat ctcagtcaatcttcatgtttttctgaacaaagcttagtttggaacttaagtctctggttg agtgatcttaagcttgaaaagcctggtgatgcggtgccagtaaatacaattggaacagtt ttaaaatgcctttccaaagcttctcggttgccaactacagactggggggtaattgtacgg cggtgcatgaaagttgaggcacagatccctcttaagtcaaccaaccagcatgatcctaag ttactaagggaagcatgcttatatttttctctagctcatgctagtcatatcagtcccctt ctgcagtttttggatgatctgactgacatactcagatttcggagattagatataaatgtg cagtctattttgctccaacatttgtctcacctaatgaagctcttctctgattcaagattg gagaaactgttcgaggatttatctgaatacttgtattcctccacctcttcgtacttgaat tactcatctgaacagagaagcatgataagaatgtcgttctgggagggcatttacaagtgc ctggtggagattgtttctgaagaatctggtggtttttcattcattaaaaaatgcattgaa tgcttgttgcctctcatgactctctgcaatgacggtcaacctgaattcatggatgaatgg tctgctgctataaagtgtcttaccaatgcccagaaaagttggctgagtgatatgctgcag attcgcaatacagccttaatcactgaaggagaatatgttgatgtggcaataaagattatc atcagagcaagattgtgctctgctggttgtggttcggcacctgagctggggaacataaag atggcgatattgtgcacaaaaactgatggtgtctggtggggtgtccttgttgagattgct gcagctatatactctgctgaaaacagtatcaaaaggcagtggcttctggatgcactagat attggctgtgttacagctcatccctcaacggtgttgcgttttgttggcttgctatgtggt agctgctgcatctatatgccgcttctcgttgttaattcgacaaatgtactgagtgacttg cccgtcaccctgccttcctttctctccagtagcatttgggatgacttagggaactctgtt gcagacaggctatggttgttgaccactcgcatttacacttgggcagaacaattagctcac ggagacgacctcactggaaatgatcatattcatagaagtgaagctgagatcgcaactttt ctggccagtattctgcgctctacatgcattgcagtcaaagactacttgactgttgataag cagctaaagcttgcgaacctcgaggcactctga

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