Phragmites australis (common reed): 133897198
Help
Entry
133897198 CDS
T10575
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paua03009
]
133897198
03036 Chromosome and associated proteins [BR:
paua03036
]
133897198
Enzymes [BR:
paua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133897198
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
Pre-60S particles
Helicases
133897198
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
133897198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
CMS1
ResIII
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
133897198
NCBI-ProteinID:
XP_062193821
LinkDB
All DBs
Position
17:complement(28453158..28457579)
Genome browser
AA seq
702 aa
AA seq
DB search
MSPALAAAEPMAVDDSASKKAKRKQLKAAAEAEAEAAVSRKKEKKEKKRKAKEPSPPLAA
SDEERSSTSSEEPVPAAKKAKNKKDKKTAEERTSSSSAEDDGELTASSDEDPADPNALTN
FRISEPLRQRLRSKGIKALFPIQATTFGLLLDGSDLVGRARTGQGKTLAFVLPILESLVN
GVHKASRRTDYGRPPSVLVLLPTRELANQVHADFEFYGATFGLSTCCVYGGSPYRPQEMA
LRKGIDIVVGTPGRIKDFIVKGTLNLKSLKFRVLDEADEMLNMGFVDDVELILGKVEDAT
KVQTLLFSATLPDWVNKLSMRFLKVDRRTVDLVGNEKLKASASVKHLALPCNKAARAQVI
PDIIRCYSHGGRTIIFTETKDSASELSGLIAGSRALHGDVAQAQREVILAGFRSGKFQVL
VATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGIAVMLFEPRYKHSVTR
LERESGVQFEHISAPQPTDVAQSAGSEAADAIATVSDSVIPVFRQQAEQLLSSSSMSAVD
LLAKALAKAVGYTDIKKRSLLSSMEGYTTLHLQTGRPMWAPGFAFTILKRFMPEEKLADV
KGATLTADGTGVVFDVPAADVEDYIQGSESAAMVTIDEVKQLPPLQDKDQSRGNSGGGRF
GRGGGGRFSGGGRGGGGGGRGRGGGSRGFSGKGSGNRFNRRN
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccgccctcgccgccgcggagcccatggccgtcgatgactccgcctccaagaag
gccaagcgcaagcagctcaaggccgccgcggaggccgaggcggaggccgccgtctcgagg
aagaaggagaagaaggagaagaagcgcaaggcgaaggagccgtccccacccctggcggcc
tccgacgaggagaggagcagcacgagctctgaggagcccgtccccgccgcgaagaaggcg
aaaaataagaaggataagaagacggctgaggagaggaccagctcgagctctgcggaggac
gacggcgagctcacggccagcagcgacgaggaccccgccgatcctaacgcgctgacgaac
ttccggatttcggagccgctgaggcagaggctcaggtccaagggcatcaaggcgctgttc
cccatccaggccaccaccttcggcctcctcctcgacggcagcgacttggtcggccgcgcg
cgcactggccagggcaaaacgttggcttttgtgctgcccatattggagtccttggtgaat
ggggtgcacaaggcatccagacgcaccgactatggcaggcctccaagtgttttggttctg
ctaccaaccagagagctagcaaaccaggtgcacgcagactttgagttttacggtgcaaca
ttcgggctttctacgtgctgtgtatatgggggttctccttatcgtccgcaagaaatggca
ttgcgaaaggggattgacattgttgttggaactcctggtcgtatcaaggatttcattgta
aagggaactcttaatttgaagtctttgaaattccgtgtccttgatgaagctgatgagatg
cttaacatgggctttgttgatgacgttgagctcattcttggcaaggttgaagatgctacc
aaagtacaaacacttctgttcagtgctactctgccagattgggtgaataagctctccatg
aggtttctgaaagtagacagaagaacagttgatcttgttggcaatgagaagctgaaagct
agtgcatctgttaaacatcttgctcttccttgtaacaaggcagcaagggctcaggttatc
ccagacattatcagatgctacagccatggtggccgaacaattattttcaccgagacaaag
gactctgcatcggagctttctggtttgattgctggatcccgtgccttgcatggagatgtt
gcgcaagctcagcgtgaagtcattcttgctggtttccggagtgggaagttccaagttttg
gttgctacaaatgtggcagctcgtggcctggacattaatgatgtgcagcttatcatacag
tgtgaacctccacgtgatgttgaagcttacatacaccggtcaggtcggacagggagagca
ggtaatactggtattgctgtcatgctttttgaacccagatataagcacagcgtgaccaga
ctagaaagggagtctggggttcagtttgagcacatctctgcgccacagcctactgatgtg
gcacaatctgctggcagtgaagcagctgatgccattgcgactgtgtcagacagtgttatt
cctgttttccggcagcaagcagagcaactgttaagctcttccagtatgtccgcagttgac
ttactagccaaagcacttgcaaaagcagttggttacacggacataaagaaaagatcattg
ctttcttctatggagggttacactacattacatcttcaaactggcaggcctatgtgggca
ccggggtttgcttttaccatattgaaaaggttcatgccagaggagaaacttgcagatgta
aagggtgcgaccctcactgctgatgggaccggtgttgtatttgatgttcctgcagcagat
gttgaagactatattcaaggttccgagagcgctgccatggtgacaattgatgaagtgaaa
caactgccacccttgcaagataaggatcagtcaagaggcaactctggcggtggaagattt
ggccgtggaggtggcgggagattttctggtggtggccgtggaggtggcggcggtggcaga
ggcagaggtggaggcagtagagggttttctggcaaagggagcggcaataggtttaatagg
agaaattag
DBGET
integrated database retrieval system
