Phragmites australis (common reed): 133897261
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Entry
133897261 CDS
T10575
Name
(RefSeq) protein HEAT STRESS TOLERANT DWD 1-like
KO
K14848
ribosome assembly protein RRB1
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paua03009
]
133897261
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
133897261
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40_Prp19
WDR55
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_EML_2
CAF1C_H4-bd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
EIF3I
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
NBCH_WD40
Beta-prop_RIG_1st
WD_LRWD1
WD40_RFWD3
Rrn6_beta-prop
FmdE
Motif
Other DBs
NCBI-GeneID:
133897261
NCBI-ProteinID:
XP_062193899
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Position
17:28736982..28742132
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AA seq
482 aa
AA seq
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MGRLKKAKKAKSNKKTKKAEASSSSNPAVASGPAKVWQPGVDALEDGEELQFDPEAYNYL
RGFSIGWPCLSFDVMRDQLGLVRSEFPHTLYGVAGTQAEKASWNYIGIFKLSNIKGKKRE
PIPASAVDGDSDMDSDSSSDEEDEEINEDTKPVVHLKKVAHAGCVNRIRSMTQNPHLCAT
WGDTGHVQVWDLSIFRNSLAESETAGHKEDDIINKLSPVKVFSGHKDEGYAIDWSPLVTG
RLVSGDCNKCIHLWEPTSNNWNVDANPFVGHSASVEDLQWSPTEADIFASCSVDGMILIW
DIRTGKKPCVSVKAHNADVNVISWNRLASCMIASGCDDGSFSIRDLRLIKGDSLVAHFEY
HKKAITSIEWSPHEPSTLAVTSEDHQLTIWDLSLEKDKEEEAEFRAKLKEQANAPEDLPP
QLLFVHQGQKDLKELHWHPQIPAMIISTAADGFNVLMPSNIDTTIPGAEPSNIDTTIPAA
EP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcttgaagaaggccaagaaggccaaatccaataaaaagaccaagaaagctgaa
gcctcgtcatcatctaatcctgctgttgcgtctggcccggctaaggtatggcaaccgggt
gtagatgcactggaagatggggaggagctccagtttgatcctgaggcctacaattatctc
cgaggatttagcattggctggccttgcttgagttttgatgttatgcgcgatcaacttgga
cttgtccgatcagagttcccacatacattgtatggtgttgctggaacgcaggctgagaag
gcttcatggaattatattggtattttcaagctttccaacataaaagggaagaagcgggaa
cctataccagcttcagcagttgatggtgacagtgatatggatagtgatagcagcagtgat
gaagaagatgaagaaattaacgaagatacaaagcctgttgtacatctaaaaaaggtggct
catgcggggtgtgtaaatcggatacgctcaatgactcaaaacccacatctatgtgctacg
tggggagatactggtcatgttcaggtgtgggatttgagcatatttcgtaattcattagca
gagtcagagacagctggacacaaagaagacgacataatcaacaagctctctcctgtcaaa
gtatttagtggccataaagatgagggctatgcaattgattggagtccacttgttactgga
agacttgtttctggtgactgcaataagtgcattcacctatgggagccaacttcaaacaac
tggaacgtagatgcaaatccatttgttggacactctgcaagtgttgaagatctacagtgg
agtcccacggaagccgacatatttgcctcttgttcagtggatggtatgatattgatatgg
gatatacgtacagggaagaaaccatgtgtttctgttaaggctcacaacgctgatgtgaat
gttatctcatggaataggcttgctagctgtatgatagcttcaggatgtgatgatggcagt
ttttcaattcgtgatcttagattaatcaagggggactccttggtagcacattttgagtac
cacaagaaagcaattacatctatcgagtggagtccacatgaaccatcaacattggctgta
acatctgaagatcatcaactcacaatttgggatctttcattggaaaaagataaagaagag
gaggccgaattcagagcgaaattgaaagagcaggcaaatgcacctgaagatttgccccca
caacttctgtttgttcatcagggccagaaagatctgaaagaattgcactggcacccacag
atacctgcgatgatcatatcaacggcagctgacggcttcaatgtgttgatgcctagcaac
atcgatacaaccattccaggtgctgagcctagcaacattgatacaaccattccagctgct
gagccatag
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