Phragmites australis (common reed): 133897295
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Entry
133897295 CDS
T10575
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
paua Phragmites australis (common reed)
Pathway
paua03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133897295
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paua01002
]
133897295
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133897295
Enzymes [BR:
paua01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133897295
Peptidases and inhibitors [BR:
paua01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133897295
Ubiquitin system [BR:
paua04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133897295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
133897295
NCBI-ProteinID:
XP_062193948
LinkDB
All DBs
Position
17:complement(26122884..26129599)
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AA seq
1112 aa
AA seq
DB search
MSTVSGTRHAPRRQSQDGSDDKVVVSLEASSPAVGSCRGVPAAVAGAHTSPIDWEGIEDE
VQAVSLSQVPPERRNMRTRRQPVTVNLPATSSDAGSGDAASQDASHSTEEATVSASGREQ
CSHYKHDTAHLDKVLLEILSSEHVASCEHCREDAPRKKGSARSKERGGKQQKKKGGGARG
TAAKVQAKAKNSDMWVCLHCGRHFCGGAVADTKPYGHARRHAKQDRHWWAAKYDDPTVAY
CLSCEKEVLIEMPKLETVVAVKTDDKMVGAVDSDALPLVNCHGNVIKGLPNLGNTCFLNA
VVQNLLALDSLRRKMLGPDVPTGPLAMSLKKLFVETSASNDAGGALSSKNLFSNICSKYP
QFRGYQMQDSHELLRCFLDGLRTEEIEARKLAEDDSNEGVPTIVDSIFGGQLSSTVSSTE
CSHSSVKHDQFLDLSLPVPSRRPPAKSVSSPPAKRTKQSIRDWNKNRRYGTIPARVSPTV
EENNKEKIQTVAECNDSQIPGSESGQVVNEKEPEPSECSESCASVSIQELKVTSNVEDNM
SWLDYVADAGEAKSEILDSADSAEAGHIWGSKDDIHGSFHPQDDALPREQILGSEHSGEN
TLDHATSLQPVILLPYKDTAKELDETEENSQNSGHAAPPPAASPVEENDTQPPSGGDIRQ
DDYVGLGDMFNEPEVTSEVKKGTGKSEDIDVMAWSSNSADDEVDDSNAPISVEGCLALYT
EPELLSEPWHCEHCTNAARPNIDERKSIVEMMGSANERKEDEEMMPGGDKEQHGVKLVMS
CNKKDIDQIMTTDGCSDNVHSEMHCMEGEYANPSLAEPEQIFNDNFSDTGNTTVQKTGVD
KTEQLNSSIYHQEQCKDLNSSAVECTSLSKQSHDLAIQQNDGCNVDITTEATSAPLSCGD
NDSVSCTATNNIKAECGGGAEEVVASSPPSDAQRILPSAKDIEDVNTRNQGRRKQMKMVG
KGNQVKDNQNKQKEDEAKVFRAAMRRILISKAPPALTINLNRFSQDSHGRFKKLKGHVRF
KEMLDIRPFMDPRSKENDNTTYHLVGVVEHMGSMTGGHYIAYVRAGRIRGRQQQSSSSKS
WFYASDGQVREASLQEVLNCEAYLLLYERVGD
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagtcagcggcacaaggcatgccccgaggagacagtcacaagatgggtctgat
gataaagtagttgtgagcttggaagcaagctccccagcagtggggagctgtcgtggagta
ccggccgctgttgctggtgcacacacctcacctattgattgggaaggcattgaagatgaa
gtgcaggcagtatcactctcgcaagtgccccctgaaaggaggaacatgaggaccaggagg
caacctgtaacagttaacctgccggccacatcctcagatgctggatccggcgatgcagct
tcacaagacgcaagccactcgacggaggaagcaactgtgtcagccagtggtagggagcag
tgcagccactacaaacatgatactgcccacttggacaaggtcctcctggagatcttgtct
tccgagcatgttgcgtcgtgtgagcattgccgggaggatgccccaagaaagaaaggcagt
gcaagaagcaaggagagaggcggtaagcagcaaaagaagaaaggaggtggtgcaagaggc
actgctgccaaggtgcaggcaaaggcgaagaatagtgatatgtgggtttgcttgcactgc
ggtcggcatttttgtggtggtgcagtagctgacacaaagccatatggccatgctagaagg
catgccaagcaggaccggcattggtgggctgcaaagtatgatgacccaacagttgcatat
tgtttgtcatgtgaaaaggaggtgttgattgagatgcctaaactagaaactgttgtggca
gtgaaaacagatgataagatggttggtgcagtggatagtgatgcattgcctttagttaat
tgccatggtaatgttattaaagggcttccaaatcttggaaacacatgcttcctcaatgca
gtggtgcagaatctcctcgcacttgatagtctgcgcaggaagatgttaggaccagatgtt
ccaacagggccccttgctatgtctctgaagaagctctttgtggagacgagtgcttcaaat
gatgctggaggtgcacttagctcaaagaacctcttctcaaatatttgctcaaagtacccg
caattcaggggctaccagatgcaagatagccatgaattactccgctgctttcttgatggt
ttacgtactgaggaaattgaagcacggaagctagcggaagatgattccaatgaaggggtt
ccaacaattgttgactccatctttgggggccagctgtctagtactgtgtccagcacagaa
tgctctcacagttccgttaaacatgaccagttccttgatctctcacttccagttccatca
aggaggcctccagccaagagtgtttcatcaccaccagcaaagaggaccaagcagtccata
cgagattggaacaaaaatcgcagatatgggacgattcctgctcgagtatctcctactgta
gaggagaataacaaagaaaagattcaaacagttgctgagtgcaacgattcccaaattcct
ggttcagaatcaggacaggtagtcaatgagaaagaacctgaaccctccgaatgcagtgag
tcatgtgcttctgtgtctattcaagaactaaaggtcacttcaaatgtggaggataacatg
agctggttggattatgttgccgatgcaggtgaagcgaagtctgagattcttgattctgca
gattctgctgaagcaggacatatttggggaagtaaggatgacatacatggttcgtttcac
cctcaggatgatgccttacccagagagcagatcttgggttctgagcactctggtgagaac
actcttgaccatgccacctctttacagcctgttatcttgcttccttacaaagacactgcc
aaggaattggatgaaactgaagaaaattcacagaattcaggacatgcagctccccctcca
gctgcctctccagtagaagaaaatgatacacaacctccatctggtggagatataaggcaa
gatgactatgttggccttggcgatatgttcaacgaacctgaagttacttctgaagtcaag
aaaggaaccggtaaaagtgaagatattgatgtgatggcttggagtagcaatagtgctgat
gatgaggtggatgatagtaatgctcccatatcagttgagggctgcttggctttgtacact
gaaccagagctgctatctgaaccatggcactgtgagcactgtactaatgcagcacgccca
aacattgatgaaagaaaaagtatcgtggagatgatgggtagtgccaatgaaagaaaggag
gatgaggagatgatgccaggtggtgataaagaacaacatggtgttaagttggtcatgagc
tgcaacaaaaaggacattgaccagattatgacaactgatggttgctcagacaatgtacat
tcagaaatgcactgcatggaaggtgagtacgcaaatccttcgttggctgagcctgaacag
atcttcaatgataatttttcagacactggaaatacgactgtacagaaaacaggtgttgac
aagaccgaacagttaaacagtagtatctaccatcaggaacagtgtaaagatttgaacagc
tcagcagtggaatgcacatctttgagtaagcaatcacatgatttagctatccaacaaaat
gatggatgtaatgtggatataaccactgaagcaacaagtgcaccacttagttgtggtgat
aatgattcagtctcttgcactgcaactaacaatataaaagctgaatgtggtggtggtgct
gaagaagttgtggctagcagccctccatctgatgcacaaagaatcttgccaagtgcaaaa
gatattgaagatgtcaacacaaggaatcaaggcaggaggaagcaaatgaagatggttggt
aagggaaatcaagtgaaagataaccaaaataagcagaaagaggatgaagcaaaggttttc
agagctgcaatgagaagaatccttataagcaaggctccacctgcattgacgattaatttg
aacagatttagtcaggattctcatggccggtttaagaaattgaaagggcatgtgcgcttt
aaggagatgcttgatataaggccattcatggacccaagatctaaggagaatgacaacacc
acttatcatctggttggcgttgtcgagcatatgggatccatgacaggaggtcattatatt
gcatacgtgagagctggcaggattaggggtcggcagcaacagagcagtagctctaagtct
tggttttacgcaagcgatggacaagtcagagaagcctctctgcaggaagttcttaactgc
gaggcttacttacttttatacgaaagggtgggagactaa
DBGET
integrated database retrieval system
