Phragmites australis (common reed): 133897302
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Entry
133897302 CDS
T10575
Name
(RefSeq) cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
133897302
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
paua01007
]
133897302
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paua03016
]
133897302
Enzymes [BR:
paua01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
133897302
Amino acid related enzymes [BR:
paua01007
]
Aminoacyl-tRNA synthetase
Class I (G)
133897302
Transfer RNA biogenesis [BR:
paua03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
133897302
Prokaryotic type
133897302
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
CysS_C
tRNA-synt_1f
tRNA-synt_1
DALR_2
DUF6825
MAP65_ASE1
RuvX
Motif
Other DBs
NCBI-GeneID:
133897302
NCBI-ProteinID:
XP_062193962
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All DBs
Position
17:complement(28710635..28715868)
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AA seq
569 aa
AA seq
DB search
MAAAAAARRATGLLPLLLSSPSRARVPHRRALALIPQPRPHRLLSHPARLFSISPFSASA
SNGAAAERARELHLYNTKSRRKEQFRPRAPGGEVGMYVCGVTPYDDSHIGHARAYVAFDV
LYRYLRYLDYEVRYVRNFTDIDDKIIARANQLGEDPFSLSKRFSDDFLSDMSHLQCLPPS
VEPRVSDHIDQIINMIRQILDNSCAYVVGGDVYFSVDNFPEYGELSGRKLDDNRAGERVA
VDERKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDL
IFPHHENEIAQSRAACCDSCINYWIHNGFVNVNSQKMSKSLGNFVTIRKVIEMYHPLALR
MFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLCDCEESCHQQQSNTGDSVPANTLNYIQ
KLHNEFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQEKRLESLSALEEKIRVVL
SVLGLLPSSYHEALQQLREKALRRASVTEEHVLQKIEERTSARKAKQYEKSDEIRRELAA
VGIALMDGPDGTTWRPSVPLSEEGVVAKT
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcggcgaggcgtgccactggccttctccccctcctcctctcctcg
ccgtccagggctcgcgtaccccaccgccgggcgctagccctgatccctcagcctcgtccc
caccgcctcctctcgcaccccgccaggctcttctccatctcccccttttccgcctccgcc
tcgaatggcgcggctgccgagagagcccgcgagctgcacctgtacaacaccaagtcgcgg
aggaaggagcagttccggccgcgagcgcccggcggggaggtcggcatgtacgtctgcggc
gtcacgccctacgacgacagccacatcggccatgcccgcgcctacgtcgccttcgacgtc
ctctacaggtacttgcgttatttggactatgaagttcgctatgttcggaactttaccgac
attgatgacaagataattgcaagagcaaaccagctgggggaagatccttttagcttaagc
aaaaggttctctgatgatttcctgtcagacatgtcccatcttcaatgtttaccaccatct
gtggagccccgtgtttcagatcacattgatcagattattaacatgattagacagatcctt
gataacagttgcgcatatgtagtgggtggggatgtctatttctctgttgacaattttcct
gaatatggagagttatctggtcgaaaactagatgataatagagctggcgaaagggttgca
gttgatgagaggaagagaaatccagctgattttgctctatggaaggctgcaaaagatggg
gagccatggtgggatagcccttggggccctggaagaccaggatggcacatagaatgcagt
gccatgagtgcacattatttgggccattcttttgacatacatggtggtggggaggatctc
atctttccacaccatgagaatgagatcgctcagagccgtgctgcatgttgtgacagctgc
ataaattactggatacacaatggttttgtcaatgtaaatagccaaaaaatgtctaaatca
cttggtaacttcgtcaccatacgcaaggtaatagagatgtaccacccgcttgctttgaga
atgttcttacttgggacacactacaggtcccccatcaactacacaatagaacaactgaat
gttgcatcagatagactgtactacacgtatcagacattatgtgattgtgaagagagttgc
catcagcaacaaagcaacactggagattcggtgcctgctaataccttaaattacatccag
aaacttcacaatgaatttgagacttcgatgtcagatgatcttcacacttcagtggcattg
gctgctatttctgaaccactgaaagttatgaatgatttgttgcacactcgtaagggaaag
aagcaggaaaaacgattggaatctctttctgccttagaagagaaaataagagtagtgctc
tctgttctaggattgctgccttcaagttatcatgaggctctgcaacagctgcgggaaaaa
gcactgagacgagcttccgtcacggaggagcatgtactgcagaagattgaagagaggact
tcagcaaggaaggcgaagcagtacgaaaaatctgacgagatccgaagagaattggctgct
gttggaattgccctcatggatggtcctgacggaacgacgtggagaccatctgtacctctt
tctgaggaaggggtggttgctaagacatga
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