Phragmites australis (common reed): 133897339
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Entry
133897339 CDS
T10575
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133897339
Transcription factors [BR:
paua03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133897339
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GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-4th_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_4
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
133897339
NCBI-ProteinID:
XP_062194023
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Position
17:complement(28676500..28681331)
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AA seq
511 aa
AA seq
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MAAASSAPFFGLGDTQMQPQASSLQQNSTPAPATAAAPPKKKRNQPGNPNPDAEVVALSP
RTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKDVRRRVYLCPEPTCVHH
DPSRALGDLTGIKKHFCRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYRCDCGTLF
SRRDSFVTHRAFCDALARESAQMTTLGAGLYVGSGSMAVGLSGAAPQMPGFADQAQSSSA
AAAIQFDHIMPSSSGSSMFRSQASASTSPFFLGGGAPPPAQDFSEDGSEHSQGGSQGGSL
LHGKPAFHGLMQFPEQNHPGSNANGNILNLGFFSGNSGGSAGSQDARLVFQDQFNGSAAG
NGSGGNNSTEQGRVVASVGNHLSSSFPSLYNSSQSVGLPQNSATALLLKAAQMGSTSSSH
NGPIALLRAAGFGASGQGTSRAAAEGTAHETYFHDLIMNSLAGGSGGFSGAAGFGSVDDG
KLSTRDFLGVGRGTMAPPGLHIGSLDPAQMK
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcctcatccgcgcccttctttgggctcggcgacacgcagatgcagccacag
gcctcttctctgcagcaaaactccacacccgctcctgccaccgctgccgcgccgccgaag
aagaagaggaaccagccaggcaatccaaatcctgatgcggaggtggtcgcgctgtcgccg
cggacgctgatggcgacgaaccggttcgtgtgcgaggtgtgcaacaaggggttccagcgg
gagcagaacctgcagctgcaccggcgagggcacaacctgccgtggaagctgaagcagaag
aaccccaaggatgtgcggcggcgggtgtacctgtgcccggagccgacgtgcgtgcaccac
gacccgtcccgggcgctgggcgacctcacggggatcaagaagcacttctgccgcaagcac
ggcgagaagaagtggaagtgcgacaagtgcaacaagcgctacgccgtgcagtccgattgg
aaggcgcactccaagacctgcggcacccgcgagtaccgatgcgactgcggcacactcttc
tccaggagggacagcttcgtcacccaccgcgctttctgcgacgcgctggctcgtgagagc
gcgcagatgacaactttgggcgccggcctctacgtcggttccggcagcatggccgtcggg
ctctccggcgcggctccccagatgcctggcttcgcagaccaagcccagtcctcttcagca
gcagcagccatacagttcgatcacatcatgccatcgtcctcgggctcctccatgtttcgc
tctcaggcgtcggcatccacgtcgcctttcttcctcggcggcggcgctcctcctccagcc
caggatttctccgaggacggtagtgaacactcccagggcggctctcaaggcggctctctg
ctccacggcaagccggccttccatggcctgatgcaattccctgagcagaaccatccgggc
agcaacgccaacggtaacatcctgaaccttgggttcttctctggaaacagcggtggctcg
gccggcagccaggacgcgcgccttgtcttccaggatcaattcaatggcagcgctgcagga
aacggtagcggcggcaacaacagcaccgagcagggcagagtggtcgcgtccgtcggaaac
cacctcagcagcagcttcccttccctgtacaactcatctcaatcggtcggcctgccgcag
aactcggcgacggcgctcctgctcaaggcggctcagatgggctcgacgtcgagcagccac
aacggtccgatcgccctgcttcgtgccgccggcttcggtgccagtgggcagggcactagc
agggctgcagcagaagggacggcgcacgagacgtacttccatgacctcatcatgaactct
ctggcgggcggtagcggcggcttctccggcgccgcagggttcgggtccgtggacgacggc
aagctgagcacaagggacttcctcggcgtcggcaggggcacgatggcgccgccggggctc
cacatcggctcacttgatccggcccagatgaagtga
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