Phragmites australis (common reed): 133897354
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Entry
133897354 CDS
T10575
Name
(RefSeq) phytoene synthase 3, chloroplastic-like isoform X1
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00906
Carotenoid biosynthesis
paua01100
Metabolic pathways
paua01110
Biosynthesis of secondary metabolites
Module
paua_M00097
Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
133897354
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
paua01006
]
133897354
Enzymes [BR:
paua01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
133897354
Prenyltransferases [BR:
paua01006
]
Terpene biosynthesis
Squalene/phytoene synthase
133897354
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Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
133897354
NCBI-ProteinID:
XP_062194043
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Position
17:complement(28656195..28659652)
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AA seq
469 aa
AA seq
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MMSGNRAVRSTACARRQHHGRWSSDTAVFLAKVRYGGRRSLAPCSVRAVGSNTIGCLEAE
QPWGGVALPSLQVAAPAPGDALAVPFEQRVHEVVLKQAALAAAAPRTSRMAAPETMAGGL
KAAYDQCGEVCKEYAKTFYLATQLMTPERRRAIWAIYVWCRRTDELVDGPNAAHISALAL
DRWESRLEDIFAGRPYDMLDAALSDTVASFPVDIQPFRDMIEGMRMDLTKSRYRSFDELY
LYCYYVAGTVGLMTVPVMGISPDSSAKTETVYKGALALGLANQLTNILRDVGEEYVSSLV
SFQMSNLAVISDFSFLFRCLILQSSLMSVFVFTRTCASRVDSARRGRIYLPQDELEMAGL
SEDDIFNSRVTDEWRSFMRGQITRARSFFRQAEEGATELNQESRWPVWASLLLYRQILDE
IEANDCNNFTKRAYVPKAKKLMALPKAYLRSLMLPSSQTQSQRHYSSLT
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccggcaaccgcgcggtgaggtcgacggcgtgcgcgcggcggcagcaccacggc
cggtggtcctcggacacagcggtgttcttggccaaggtcaggtacggggggcgacgtagc
ctggcgccgtgctccgtgcgcgccgtgggttccaacaccattggctgcctcgaggccgag
cagccgtggggcggcgtcgcgctgccgagcctgcaggtcgcggctccggcgccgggggac
gcgctcgccgtgccgttcgagcagagggtgcacgaggtcgtgctgaagcaggcggcgctc
gcggcggcggcaccgaggacgtcgcggatggccgcgccggagacgatggccggcgggctg
aaggcggcctacgatcagtgcggggaggtctgcaaggaatacgccaagacattctacctg
gcgacgcagctgatgaccccggagaggaggagggcgatctgggcaatatacgtgtggtgc
aggagaacagacgagctcgtcgatggcccgaacgcggcccacatctcggccctggcgctg
gaccggtgggagtcgcggctggaggacatctttgccgggcgcccgtacgacatgctcgac
gccgccctctccgacaccgtcgccagcttccccgtcgacatccagccgttcagggacatg
atcgaggggatgcgcatggacctgaccaagtcccggtacaggagcttcgatgagctctac
ctctactgctactacgtcgccggcaccgtcgggctgatgacggtgccggtgatgggcatc
tcgccggactccagcgccaagaccgagaccgtctacaagggggcgctggcccttggcctg
gccaaccagctcaccaacattctcagggacgtcggggaggagtacgtctcatcgcttgtg
tcatttcagatgtctaatcttgcagtcatctctgatttcagttttcttttcagatgtcta
atcttgcagtcatctctgatgtcagttttcgtatttacacgtacgtgtgcttcacgtgtt
gacagcgcaagaaggggaaggatctatctcccacaagacgagctggagatggccggcctc
tccgaggacgacatcttcaacagccgtgtcaccgacgagtggagaagtttcatgagaggt
cagatcacgagggcgagatcgttcttcagacaggccgaggaaggcgcgaccgagctcaat
caggagagccgatggccagtgtgggcttctctgcttctgtaccggcaaatcctcgacgag
atcgaggcgaacgactgcaacaacttcacgaagagagcctatgttccgaaggcaaagaag
ctcatggcattgcctaaggcttacctgagatcactgatgctcccctcttctcagactcag
agtcagagacactactccagcctcacataa
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