Phragmites australis (common reed): 133897501
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Entry
133897501 CDS
T10575
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related-like
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133897501
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133897501
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133897501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_UBOX
Prok-RING_1
zf-RING_Vps41
zf_RING_Vps8_fungal
VPS18_RING_C
zinc_ribbon_16
Prok-RING_4
PHD_NSD
zf-C3H2C3
PHD
zf_RING_Vps8
RINGv
Motif
Other DBs
NCBI-GeneID:
133897501
NCBI-ProteinID:
XP_062194238
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All DBs
Position
17:complement(27770051..27773928)
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AA seq
312 aa
AA seq
DB search
MEDSKGSGGGGGGADKPSAEPNPNPPLAAAAAATEAGHEGDAAAEAARRPFTALSQEEAD
LALARVLQEQERAYMLLQMNGGGGVGSDYGSSEAGSYEYGEEGEEEELEHHLRVHHHEHP
VGDGDGEGEGAEGAEGSDYEEDFEEDEEVEPELDPAEFEDDEAYARALQDAEEREVAARL
MALAGLSDWRAVDVEHEEHVNDPQEAWQEVDPDEYSYEELVALGEVVGTESRGLSADTLA
SLPSVTYKTQDVQDGNTEQCVICRVEFEEGESLIALPCKHSYHPECINQWLQINKVCPMC
SAEVSTSGNKEA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggaagattcgaaggggagcggcggcggcggcggcggcgccgataagcccagcgctgag
ccaaaccctaacccgcctctggcagccgcggcggcggctaccgaggccgggcacgagggc
gacgccgcggctgaggcggcgcggcgcccgttcacggccctcagccaggaagaggccgac
ctcgccctcgcccgcgtcctgcaagagcaggagcgggcgtacatgttgcttcagatgaac
ggaggcggtggcgtgggcagcgactacgggagctcggaggctgggagctacgagtacggc
gaggagggcgaggaggaggagttggagcaccacctccgcgtccaccaccacgagcacccg
gtgggcgatggtgacggcgagggcgagggtgccgagggcgccgaggggagcgactacgag
gaggattttgaggaggatgaggaagtagagccagagttagatcctgctgagtttgaggac
gatgaggcttacgctcgtgcgctgcaggatgctgaggagcgtgaggtagctgcccggctc
atggctctcgctggtctcagcgattggcgagcagtggatgtggagcatgaggagcatgtt
aatgatccacaggaggcatggcaggaggttgatccagatgagtactcttacgaggaatta
gttgcattgggcgaagtagttgggacagaaagcagaggtctctctgctgatacacttgct
tctttaccttcagtaacatacaagacacaagatgttcaggatggcaacacagagcaatgt
gtaatttgccgtgtggaatttgaggaaggtgaatctttgattgcacttccctgcaagcac
tcctaccatcctgaatgcataaaccaatggttgcagataaataaggtatgccctatgtgt
agcgcagaagtttcaacctcaggcaacaaggaggcatga
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