Phragmites australis (common reed): 133897602
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Entry
133897602 CDS
T10575
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2-like
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paua03400
]
133897602
Enzymes [BR:
paua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
133897602
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
133897602
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
133897602
NCBI-ProteinID:
XP_062194373
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Position
17:27737151..27744054
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AA seq
615 aa
AA seq
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MVKIVTYNVNGLRPRVAQHGSLRRLLDALDADIICFQETKLSRQDLSADVIMAEGYEAFV
SCNRTWKGRGAYSGVATFCRVTTAFSSQEVALPVAAEEGFTGLQDYAKNSEILGDFVLAM
PVEEEGLGEITREDLLSVDNEGRCIITDHRHFVLFNIYGPAVEEDDKERVRFKLLFYKIL
QKRWEHLLALGKRVFVVGDLNIAPASIDKCDAPPGFEKQMFREWLRSMLKEHGGPFFDAF
RSKHPERTGAYTCFNQKVGAEEYNYGSRIDHILISGACLHHCYSVEDHSIYYCHVEECEI
MNHFKRGNSEKLSKWKGGRSSKLEGSDHIPVYILLKEIPELPVHNIPPSAARYLPEVRGR
QSTIVSFLKKGKTYEPQDATNLNLSEDRVDDSCCSDGLENKTIAKEELAASITECSKGGN
LPSLICKGTNLDQWINGGSSGVSHNSKKASFSSTKSVPNKKIKRNLSSQPTIKSFFQQPG
SKTGNASTSTLVTPVETVHYMNETCVPNDDSLPENMQCTISAAEDQGNTNTSCSLSTDKC
NAATLEWQRIQQKMKMTLPCCKGHREPCIPRSVKKGSNIGRLFYVCARAQGPASNPEANC
GHFQWAPVKSKEKCL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagatagtgacgtacaacgtgaacgggttgcggccgcgggtggcgcagcacggc
tcgctccgccgcctcctcgacgccctcgacgccgacatcatctgcttccaggagaccaaa
ttgtcgaggcaggacctgtctgcagacgtcataatggctgaaggatatgaggcttttgtt
tcatgcaatcgcacatggaaagggcgtggggcatactctggcgttgcaacattttgtcga
gtaacaacagcattttccagccaggaggttgctttgccagtagcagccgaagaaggcttt
actggactacaggactacgccaaaaacagtgaaatccttggggatttcgttcttgcaatg
cctgtagaagaggagggtcttggtgaaatcacgcgagaggacctgctaagtgtggacaat
gaggggcggtgcatcatcactgatcacagacattttgttcttttcaacatatatggccca
gctgttgaagaagatgataaagagcgggttcgttttaagctactattttacaagatattg
cagaaacgatgggaacatctattggctcttggaaagagagtttttgttgttggtgatttg
aatattgctcctgcttctatagataagtgtgatgcgccgcctggtttcgagaagcaaatg
ttccgagaatggctgagatctatgctgaaagaacatggaggtcccttttttgatgctttc
agatcaaaacaccctgaaaggacaggcgcatatacttgctttaatcaaaaagttggtgct
gaagaatacaattatggttctagaatagatcacattctcatttctggtgcctgtctccat
cattgttattctgtggaagaccatagcatttattattgccatgtagaagaatgtgagata
atgaatcacttcaaaagagggaattctgaaaaattgtcaaagtggaaaggaggaaggagt
agtaagctagaaggatctgatcatattccagtttatattttactgaaagaaatacctgaa
cttccagttcataatatcccaccatcagctgcaagatatcttccagaggtccgtggacga
caatcgactattgtatcattcctcaagaaagggaaaacttatgaaccgcaagatgccaca
aatttaaacttatccgaggatagagtagatgatagctgttgtagcgatggcttggaaaat
aaaactatagctaaggaagaactggcagctagtataactgagtgttcaaaaggtggtaac
cttcctagtttgatctgtaaggggacaaatcttgatcaatggataaatggtggttcaagt
ggtgtctcccataatagcaagaaagcttcattttctagcaccaagtctgtgccaaacaag
aagattaaacgcaacttatcctctcaaccaacaatcaagtcattttttcaacaaccaggg
tcaaagacaggaaatgccagtaccagtaccttagttactccagtggaaacagtacattat
atgaatgaaacttgtgttccaaacgatgatagtctgccagaaaacatgcagtgcacaatt
tcagctgccgaagatcagggtaacacaaatacatcctgttcactttcaacagacaagtgt
aatgctgcaacattagagtggcaaagaatacaacaaaaaatgaagatgactctaccatgt
tgcaaaggacatcgtgaaccatgcattccaaggtctgtgaagaagggctctaatataggc
cgtttattctatgtctgtgctcgtgctcagggacctgcatcaaatccagaagcgaattgt
ggtcactttcaatgggcacctgtaaaatctaaagagaaatgcctgtga
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