Phragmites australis (common reed): 133897682
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Entry
133897682 CDS
T10575
Name
(RefSeq) transcription initiation factor TFIID subunit 2-like
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
paua Phragmites australis (common reed)
Pathway
paua03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133897682
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paua01002
]
133897682
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133897682
03036 Chromosome and associated proteins [BR:
paua03036
]
133897682
Peptidases and inhibitors [BR:
paua01002
]
Metallo peptidases
Family M1
133897682
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
133897682
Coactivators
SAGA/TFTC/STAGA complex
133897682
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
133897682
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF2_3rd
TPR_TAF2_C
Peptidase_M1
Peptidase_M1_N
Motif
Other DBs
NCBI-GeneID:
133897682
NCBI-ProteinID:
XP_062194463
LinkDB
All DBs
Position
17:20226029..20240916
Genome browser
AA seq
1366 aa
AA seq
DB search
MAKARKQKGDGGGGGATVLHQKLCLSIDMENQLIYGYTEIKVLLAENGTFALHADNMTIR
SILVDGETVEFDYSPHWKNDGDQPNWSSISCSKTAADAACSTYISSLNREAVPNLIVSSE
RSVKSITEQQFDKNSEKHEENGGRLEELGGKPVQTSDDQAVNGCNGSAVEEEKEKEEENG
NGNGNEKNKENGIETETEEVKNTKLIHIDYILEKAETGVHFVGNVLHSSSQIRRAHCWFP
CIDSATQRCPFDLEFTVSTNLVAVSNGDLLFQVLCKEDPSRKTYVYKLNTPVSAQWISLV
VGPLEVLPDRNDISVSHICLSPALSKLENTISFFHDAYSCYEDYLAAPFPFGLYKQIFLP
SEMTVLPTSLGASTCIFSSDILHDEKVIDQIIGTRIKLAYALAKQWFGIYTSAEEPNDEW
LLDGLAGFLTDLFIKRYLGNNEARYRRFKANCTVCESDVSGATALSSPAASSDLYGTQTI
GSYGKIRLLKAVAVLQMLEKQMGPDSFRKILQVIVAPNRASRTLSTKEFRHLANKVGNLE
RPFLKEFFPRWVESCGCPIMRLGISYSKKRNMIELAVSRGCTAKATPDFDSHANGDIREG
DAGWPGMMSVRVHETDGAYDHPVLPMAGEALQVVEIQCHSKLAAKRIWKSKKNAKLDGSD
DNIDASTQENRTSMDSPLLWIRVDPEMEYLAENHFHQPVQMWINQLEKDKDVISQSQAIA
VLENLPQLSIPVVNALNNFLNDTKAFWRVRVEAAYALAVTASEATDLAGLLHLVKFYKSR
RFDADIGMPRPNDFHDIPEYFVLEAIPHAVALARSSDKNSPREAIEFILQLLKYNDNNGN
IYSDVYWLSAMVQAIGELEFGQQGIGFLSSVLKRIDRLLQFDNFMPGYNGVLTVSCIRTL
ARIARRVSSSICLDRICELIAPFRNMDKPWKVQIEASRILIDLELHHKGLDAALLLFLKY
VDEEKSLRGATKLAVHVLRICQTNTDPHLNDQIKLTTLIGLLHLLAGIKAYNNIFLRHHV
FCILQVAAGRSPTLYGVPKVVTAPLVVQDICSDQHTKADSSIPQPSRPQEPSTSTPSVRE
VLPTSGPTKDADNISNCSERRNVVKIRVKRTASSSKASDADHRDHSHGGRNENEVGPCSS
MSVDAPMVGAANEPLNVSNHNVEEQNSCHDRESRMSASFSNAKLIDRHEICKELQCTADS
RLDALPKDQFSPVINPLEVVDKPGSQLEGVSTIYDGNPAPESMNGLEAKERKKDKKDKKR
KRDGKRDKKDDPEYLEKKRLKKEKKRMEKESARKQQEGEGVPSSEQQNIVKSSGSQEVLP
ARPPAPVRSSEPQVSSKEATVDTAQTTAKPKIRIRVKPLQRQAGGS
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggcgaggaagcagaagggcgacggcggcggcggaggcgccaccgtgctccac
cagaagctctgcctctccatcgacatggagaaccagctgatctacgggtataccgagata
aaagttcttctagccgagaatggcacttttgctctacatgctgacaatatgacgatcagg
agcatactggtggatggtgaaactgtcgagtttgactattcccctcattggaaaaatgat
ggcgaccaaccgaattggtcttcgatatcatgttcgaagactgctgctgatgctgcatgt
tcaacatatatttcgtctctaaatagagaagctgtacctaatcttattgtgtcatctgag
agatcagtcaaatcaataactgagcaacagtttgacaaaaacagtgaaaagcatgaagaa
aatggtggaaggcttgaagaacttggtggaaagcctgttcaaacttctgatgatcaagct
gttaatggttgcaatggttctgcagtggaagaggaaaaggaaaaggaagaggaaaatgga
aatggaaatggaaatgaaaagaacaaggaaaatggaattgaaactgaaactgaagaggtg
aagaacacaaaactgattcacatagattatattttggaaaaggctgaaactggcgttcac
ttcgtcggcaatgtcctgcatagtagtagtcagataagacgtgcacactgttggtttcct
tgcattgatagtgccacacaacgctgtccatttgacctagagtttacagttagcacgaat
ttagttgctgtcagcaacggtgacttgcttttccaggtcctatgcaaggaagatccttca
agaaaaacttacgtgtataaattgaacactccagttagtgcacagtggatatccttggtt
gttggtccacttgaggttctccctgacaggaatgacataagtgtctcacacatatgttta
tcccctgctttgtcaaagcttgagaacacaatctcatttttccatgatgcgtacagctgt
tatgaagattatcttgctgcaccatttccctttggtttgtacaagcagatttttcttcca
tctgaaatgacagtattaccaacaagcttaggagcttccacgtgcatcttcagttcagat
atcttgcatgatgagaaggttatagatcagataattggcacaagaatcaaattagcttac
gcccttgcaaagcaatggtttggaatatacacaagtgcagaggagcccaatgatgaatgg
ctgttggatggtttggctggttttcttactgatctatttatcaagcgttaccttgggaat
aacgaggcacgatataggcgtttcaaggctaattgcactgtatgtgaatctgatgtcagt
ggcgcaactgctttgagctctccagctgcttcaagtgatttatatggaactcaaacaatt
ggttcatatgggaaaattcgtttgttgaaggcagtagctgttcttcaaatgttggagaaa
cagatggggcctgattcctttcggaagattttgcaggtaatagtggctccaaatcgtgcc
tcaagaacactaagtacaaaagagttcaggcaccttgcaaataaggttggtaacctggaa
cgcccattcctgaaagaattctttccacggtgggttgaatcttgtggatgtcccattatg
agattgggaatctcctatagcaaaaaaaggaatatgattgaattagccgtttcaaggggt
tgcacagcaaaagctacacctgattttgatagtcatgccaacggtgatattagagaaggt
gatgctggatggccaggaatgatgagcgtacgtgttcatgaaactgatggggcgtatgat
catccagttctgccaatggctggtgaagctttgcaggtggtggaaatacagtgtcattcc
aaactagcagcaaagcgcatttggaaatccaaaaaaaacgcaaaacttgatggttctgat
gacaacatagatgcctctactcaagagaaccggacaagcatggattcacctttgctgtgg
atcagagtagacccggagatggaatatcttgctgagaaccattttcaccagcctgttcag
atgtggatcaatcaattggagaaagacaaagacgttatatcacaatcacaggcaatagca
gtgctggagaatttacctcagctctcaattcctgtggttaacgccctcaataatttccta
aatgacacaaaggccttttggagagttagagttgaagcggcatatgcattagcagttaca
gcatctgaggcaactgatttagctgggttgcttcacctggttaaattctataaaagtcgt
cgctttgatgcagatattggaatgcccaggccgaacgacttccatgatatcccagagtac
tttgttcttgaggcaatcccccatgcagtagctcttgctagatcatcggacaagaatagc
ccaagggaagccattgagtttattcttcagctcctgaagtacaatgataacaatggaaat
atttactcagatgtgtactggctatctgcaatggtacaggcaataggcgaactggaattt
ggccagcagggcataggcttcctatcctctgttctcaagcgaatagatcgactcttgcaa
tttgacaactttatgcctggttacaatggggtcttgactgtcagctgcattcgtaccctt
gcacgaatagcaaggagggtgtcatcttccatatgccttgatcgcatttgtgaactaatt
gccccctttcgcaacatggacaaaccatggaaagttcaaattgaagctagcaggattctt
attgatcttgagttacaccataaaggccttgatgcagctcttttgttgttcttgaaatat
gttgatgaagagaagtctttgcgaggagcgacaaagttggctgttcatgtcttgcgtata
tgccaaacaaatactgatcctcaccttaatgatcaaataaaattgacgactctgattggt
ctccttcacctgcttgctggcataaaggcatacaacaacatatttcttcgtcatcatgtg
ttctgcatattgcaagttgctgctggaaggtccccaacattgtatggtgttccaaaggtt
gtcacagcccctctggtggtccaggacatatgtagtgatcagcacactaaagctgattcc
tctattcctcaaccatcaagacctcaagaaccttccactagcactcctagtgtccgtgag
gtcttacctacctccggaccgactaaagatgctgataatatatctaactgcagtgaaagg
aggaatgttgtcaaaattagggtgaagcgtactgcatcttccagtaaagcatctgatgct
gaccatagagatcattctcatggtggaagaaatgaaaatgaagtgggtccatgtagttct
atgtcagtggacgcccctatggttggagcagcaaatgagccattaaatgtaagcaatcat
aacgttgaggaacagaactcgtgtcatgaccgtgaatcaaggatgtctgcaagctttagc
aatgctaaactaatcgacaggcatgaaatttgcaaggaactacagtgtactgctgattca
aggctggatgctcttcctaaggatcagttctctcctgtcattaatccgctggaagttgta
gacaagcctggtagtcagcttgaaggagtctccaccatctatgatggaaacccagctcca
gaatctatgaatggactggaagcaaaagagaggaagaaggacaagaaagataagaagcga
aaacgagatggaaaacgggataagaaagatgaccccgagtatctggagaaaaagagactt
aagaaagagaagaaaagaatggagaaagaatcagccagaaagcagcaggaaggtgaaggg
gttccttcttccgaacagcagaacatagtgaagtcttcaggctcgcaggaagttttaccg
gcaaggccaccagctccagtgcgaagttctgagccccaagtttcaagcaaggaagcaact
gtagataccgcacagacaacagcgaagccaaagatacggattagagtcaagcccttgcaa
agacaagctggagggagttga
DBGET
integrated database retrieval system
