Phragmites australis (common reed): 133897732
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Entry
133897732 CDS
T10575
Name
(RefSeq) zinc finger CCCH domain-containing protein 59
KO
K24939
CWF19-like protein 1
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133897732
Spliceosome [BR:
paua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
133897732
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CwfJ_C_1
CwfJ_C_2
zf_CCCH_4
zf-CCCH
zf-CCCH_4
Torus
zf-CCCH_10
zf-CCCH_3
HIT
Motif
Other DBs
NCBI-GeneID:
133897732
NCBI-ProteinID:
XP_062194532
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Position
17:17305676..17309706
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AA seq
606 aa
AA seq
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MAANPPPPAPPRILLAGDAHGRLHQLFKRVNSVNQSTGPFHALLCVGQFFSPEGEAEVGD
VADYLEGRAAVPVPTYFTGDYGPAAPRLLSKAAADARGFAPGGIEICPNLFWLRGSNRFT
LHGLSVVYLSGKKGPGGPGCYSQDDVDALRALAEEPGIVDLFLTNEWPAGVVNEADTSNV
LNQVLDPHGYDPVVAELVAEIKPRYHIAGTKGVFYSREPYVNDSAAHVTRFIGLASVGNK
EKQKFIHAISPTPASTMSSADIHARPPNATLSPYVAPVKSVPIGEDPKRPAENTDAQYWR
YDVKRQRQGEAEGGRLCFKFTSSGSCPRGSKCNFRHDEEAMEHYNRNVCFDFLNKGKCER
GPECKFVHSLSGGAAVRDARPRSERRNVESSCWFCLSSPDVESHLVISIGEGYYCALAKG
PLVPNHVLMIPVEHCPNTLMMPPEAEAELGRYKNALAKYFEKQGKAAVYFEWVSKHSHHA
NLQAVPVPLPKADAVKKIFHLAAKRLGFEFSVVNPDGDANQGRESLRSQCESKSSLFYVE
LPEGRILLHTVDGNEKFPAQFGREVLAGLLSMADRADWRNCKLSKEEEIRMVDDFKHGFC
EFDPAE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaacccgccgcctccggcgccgccgcgcatcctcctcgccggcgacgcccac
ggccgcctgcaccagctcttcaagcgcgtcaactcggtgaaccagtcgacggggccgttc
cacgcgctgctctgcgtggggcagttcttctcccccgaaggcgaagccgaggtgggggac
gtcgcggactacctcgaggggcgcgccgccgtgcccgtcccgacctacttcaccggcgac
tacggccccgccgcgccgcggctgctgtcgaaggccgccgctgacgcgcgggggttcgcc
cccggcggcatcgagatatgccccaacctcttctggctcaggggcagcaaccgcttcacc
ctccacggtttgtcagtggtttatttatccgggaagaagggaccaggaggacctggctgc
tacagccaggatgatgttgatgccctgcgggctcttgcagaagagcctgggatcgtcgat
ctgttcttgactaacgaatggccagctggggtggtgaacgaggctgatacgtccaatgtg
cttaatcaggttttggatcctcatgggtatgatcctgtggttgctgaattggttgccgag
attaaaccaagatatcatattgccggtactaaaggtgtattttattcaagggagccatat
gtcaatgattctgctgcgcatgttacccgttttattggtcttgctagtgtcggcaacaaa
gagaagcagaaatttattcatgcgatttctcctactccagcatctacaatgtccagtgct
gatatccatgccaggcctccaaatgctactttatcaccgtatgttgctccagtaaaatca
gtccctattggagaagatccaaaacgtccggctgaaaacactgatgcgcaatattggcgt
tatgatgtcaagcggcaaaggcaaggggaagcagaaggtggtagattgtgtttcaaattt
acatcctcagggtcctgtccacgagggagtaaatgtaattttaggcacgatgaggaggca
atggagcactataatagaaatgtctgttttgattttctaaacaagggaaagtgtgagagg
ggcccagagtgcaagtttgtccacagcctttcagggggtgctgctgtaagagatgcaaga
cctcgtagtgaacgaagaaatgtggagagcagttgctggttctgcttgtcaagtccagat
gttgagtcacatcttgtcattagtatcggggaaggttactactgtgcacttgcaaagggg
ccacttgttccaaaccatgttctaatgataccagttgaacactgccccaacacattaatg
atgcctccggaagcagaggcagaacttgggagatataagaatgctctggctaagtacttt
gagaagcaaggaaaggcagcagtctactttgagtgggtttcaaagcactcacaccatgca
aaccttcaggctgttccggtaccattgccaaaagcagatgctgttaaaaagatttttcat
ctagcagccaaaagacttggatttgaattttctgtggtgaatccagatggtgatgctaat
caaggtagggaatcattgagatctcagtgtgaaagcaaatcaagcttgttttatgttgag
ctcccagaaggtagaatactcttgcacacggttgatggtaatgagaagttccctgctcaa
tttggacgtgaggttttagcgggattgctaagcatggctgatcgcgcagattggaggaac
tgtaagctctccaaggaagaggaaatccgaatggtggatgattttaaacacggtttctgc
gagtttgatcctgcggagtga
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