Phragmites australis (common reed): 133897952
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Entry
133897952 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133897952
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
paua Phragmites australis (common reed)
Pathway
paua03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
133897952
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Gene cluster
GFIT
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NCBI-GeneID:
133897952
NCBI-ProteinID:
XP_062194772
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Position
17:3298853..3307994
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AA seq
824 aa
AA seq
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MEPPAAKEAPPLPQPAAEEDGVLSATASMAREAAVMFQNHWYADCAEVLAQLLLKKEGDP
KVLHNMAITESFLDGCPDPKRLLKILDDVKKRSKELACASREQADSANGIGNNASSGSRG
SGIVPPFPAAHNASTYGDEFDTTIITFNTAVILYHLHDYESALSVLDPLYRNIEPIDETT
ALNVCFLLLDIALALQDATKAADIIQYLERSFGVANTMNQNENAIIAQQQSAQPKPPAKS
NTPPDSDSNAYAGGCENLSVGSFSDDTLEFESFYSTFDGGHQNLGRPILNDFSRASADLA
ATAADLKVRLQIYKVRLLLLTRNLKVAKRELKVLMNMARGRDSSTEILLKSQLEYARGNY
RKAVKLLSTPNNRTEPAMLAMFYNNLGCILQQQRSNHTSVWCFSKALKYSLSLHSDKPLK
LSALSQDKSCLISYNCGIQHLMCGKPFLAARCFREAMPLFYKRPLFWLRFSECSLLALEK
GLLCANGASSCNDEIEVNVVGSGKWRYLIINPVNSRSNSDSAGVTSDEHGNLVSLEFARQ
CLHNAQLLLDASEQENLVPASGTEDCNQGAVQGHKSSGQKSTASTDLKIPGSSLTNANGE
QKGTSLNATLQSSLALYDDICRKENLKIRQAVLGNLAFVELCRENPLKALSFAKSLQQLP
DCSRMYVFLSHVYAAEALCALNRPKDAAEQLSVYLRDDNDIELPYNVENCEKALVEKDSD
GEDSVTPALTKPTSEESQHSESLKPEEARGVLYIDLGMTAAVQGELEQANYMVSRGLAML
PNNPRAVLASVYMDLLQGKSQEAIMKLRLWRNVRFRPSSVAVSS
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggagcccccggcggcgaaggaggcgccaccgctgccccagcctgcggcggaggaggac
ggggtgctctcggcgactgcgtccatggcgagggaggccgccgtgatgttccagaaccac
tggtacgccgactgcgccgaggtgctcgcgcagcttctgcttaagaaggagggcgatccc
aaggtcctccacaatatggccatcacagaatctttcttggacggttgtcctgatccaaag
aggctgcttaaaattctagacgatgttaagaaaagaagtaaagaacttgcatgtgcctct
agagaacaggctgattctgccaatgggataggaaacaatgcttcttcaggatcaagaggg
agtggcattgtaccaccttttcctgctgcacataatgcgtcaacctatggggatgagttc
gacacaaccataataacattcaacacagctgtcatcctttatcatcttcatgactatgaa
tctgccctatctgttttggacccattgtaccgaaatattgaaccaattgatgagacaact
gctcttaatgtatgctttcttttattggatattgcattagctttgcaagatgcaacaaaa
gctgcggatataattcagtacttggaaaggtcatttggagtagctaacacaatgaaccag
aatgaaaatgctatcatagctcagcagcaatcagctcaaccaaagcctcctgcaaaaagc
aacacgcctccagattctgattcaaatgcttatgctggtggatgtgagaacctttcggtg
ggaagtttctccgatgatacactggaattcgaatctttttactctacttttgatggtgga
catcagaacttgggtaggcctatcttaaatgatttctcaagggcatctgctgatcttgct
gctactgctgctgatttgaaagttagattgcaaatttacaaggtccggcttctactgctc
actaggaaccttaaggttgcgaagcgagaactcaaagttctaatgaacatggcacgtggt
agggattcgtcaacagagattctcttgaaatctcagctggagtatgcccgggggaactat
cggaaggctgtgaagctattgagcacaccgaataatcggactgaaccagcaatgctagcc
atgttctacaacaaccttggatgtatactacagcaacagagatctaaccacacctctgta
tggtgctttagcaaagcgctgaagtatagcttatctcttcattcagataaaccattgaag
ctgtctgcattatcacaagacaagtcttgtcttatttcatacaactgtggtatccaacat
ttgatgtgtgggaaaccttttttagcagctcgctgttttcgtgaggccatgccgctcttc
tacaaacgaccccttttctggcttcgtttttctgagtgtagtctgcttgctctagaaaag
ggcctcctgtgtgcaaacggcgcttcttcgtgcaatgatgagattgaagtcaatgttgtg
gggtcaggaaaatggcggtacttaattatcaacccagtgaattcgagaagtaattcagat
tctgcaggagtgacttcagatgaacacggaaatttggtatcacttgaatttgctagacag
tgtttacacaatgcccaactactgttggatgcttctgagcaggaaaatctggtgcctgca
tctggtacagaggattgcaaccaaggggcagtacaaggacataaaagctcaggtcagaag
agcactgcaagtacagatttgaaaattcctggttcatctctaactaatgcaaatggagaa
caaaagggaacgagcttgaatgccaccttgcagagctctcttgctttgtatgacgacatc
tgtagaaaagagaacctcaaaattagacaggccgtcctggggaacttggcatttgttgaa
ttgtgtcgtgagaatcccttgaaagccttgtcttttgcgaagtcgctacagcagctgcca
gactgctctaggatgtatgtattcctcagccatgtatacgcagccgaagctctgtgtgct
ctgaatagaccaaaggatgctgctgagcagttatcagtttatcttagagatgacaatgat
attgagttgccgtacaatgtggagaactgtgaaaaggcccttgttgagaaagacagtgat
ggtgaagactcggttacccctgcactcacaaaaccgacttcagaagaatctcagcactct
gagagcctcaagcccgaggaagcccgaggtgttctgtatattgaccttggcatgactgct
gcagtgcagggagaacttgagcaggctaactatatggtgagccgtggtcttgccatgctt
cccaacaaccctagggcggtgctagcgtcagtttacatggatcttctgcagggaaagtcc
caagaggctatcatgaagttgagactgtggagaaatgtgagatttagacccagtagtgta
gcagtcagcagctga
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