Phragmites australis (common reed): 133898288
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Entry
133898288 CDS
T10575
Name
(RefSeq) glycine--tRNA ligase, mitochondrial 1-like
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
133898288
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
paua01007
]
133898288
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paua03016
]
133898288
03029 Mitochondrial biogenesis [BR:
paua03029
]
133898288
Enzymes [BR:
paua01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
133898288
Amino acid related enzymes [BR:
paua01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
133898288
Transfer RNA biogenesis [BR:
paua03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
133898288
Mitochondrial biogenesis [BR:
paua03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
133898288
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
133898288
NCBI-ProteinID:
XP_062194901
LinkDB
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Position
18:complement(27257207..27262430)
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AA seq
735 aa
AA seq
DB search
MVFMRFRPQLIISSFSRSPKPRTPPAATLAAAARRRHTTAVASSMAAPSEDALRRALAER
QAAVDAQAEAVRALKAAGGASKAKVDAAVEALKALKIEAGAAARRLQQSVGSGGGAAREE
MRQAVVNTLERKLFYIPSFKIYRGVAGLYDYGPPGCRVKANVLAFWRQHFVLEENMLEVD
CPCVTPEIVLKASGHVEKFTDLMVKDEKTGTCYRADHLLKDFCKEKLEKDLTLPQEKADE
FKRVLAILDDLSAEELGAKIKEYGIVAPDTKNPLSDPYPFNLMFQTSIGPTGLSVGYMRP
ETAQGIFVNFKDLYYYNGQKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPE
DKSHPKFADVADLEFLMFPRELQLSGDSAKLMKLGEAVSKGTVNNETLGYFIGRVYLFLT
RLGIDKDRLRFRQHLPNEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLKAHSEKSGV
PLVAHEKFSKPREVEKLVIVPSKKDLGLSFKGNQKMVVEALEAMNEKEALEMKAALESKG
ETNFKVCTLGKDVVITKKMVSISMEKKMEHQRTFTPSVIEPSFGIGRIIYCLFEHSFYTR
PSKSEEEQLNVFRFPPLVAPIKCTVFPLVKNQEFDAAAKVIAKALTAAGISHIIDTTAIS
IGRRYARTDEIGVPFAVTVDSATSVTIRERDSKEQVRVDINEVSSVVRQLTEGQSTWADV
SATYPSHVGPQGDQE
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggtctttatgcgattccgcccccagctcatcatctcctcattctcccgctcccctaaa
cccagaaccccgcccgccgcaaccctagccgccgccgcgcgccgccgtcacaccaccgcc
gtcgcatcatccatggccgcgccgtcggaggacgcgctccggcgggcgctcgcggagcgg
caggccgccgtggacgcgcaggccgaggccgtgcgggcgcttaaggccgccggcggcgcg
tccaaggccaaggtggacgcggctgtggaggcgctgaaggcgctcaagatcgaggccggc
gccgccgcgcgccggttgcagcagtccgtcggctccggcggcggcgccgcgcgggaggag
atgcggcaggccgtggtgaacaccctggagcggaagctgttctacataccctcgttcaag
atctaccggggcgtcgcgggtctctacgactacgggccaccgggctgccgcgtcaaggcc
aacgtcctcgccttctggcgccagcactttgttttggaagagaacatgttggaagttgac
tgcccctgtgtgactcctgagattgtcttgaaggcatcaggccatgtcgagaagtttact
gacctcatggttaaagatgagaaaacaggcacatgctaccgtgctgaccacttgttaaaa
gatttttgcaaggagaagcttgagaaagaccttaccttgccccaagagaaggctgacgag
tttaagcgtgttcttgccattttggatgacctctcagcagaggaacttggtgcaaagatt
aaggaatatggcattgttgcccctgatacaaagaacccgctctctgatccctacccattc
aatcttatgttccagacatctattggtcccactggtcttagcgtggggtatatgcgacca
gagactgcacaaggtattttcgtgaacttcaaggacctgtactattacaatggccaaaag
ctcccttttgcagcagctcaaatcgggcaagcttttagaaatgagatatcgccgcgacaa
ggtcttctacgagtgcgcgaattcacattggcagagattgagcattttgtagacccagag
gacaaatcacatccaaaatttgctgatgttgctgatctggagttcttgatgttcccaaga
gagctgcaactctcaggggattcagccaagttaatgaagcttggggaagcagtttcaaag
ggaactgttaataatgagacacttggttacttcatcgggagggtctatcttttcctgaca
cgtttgggaattgataaggatcgcctgcggttcaggcagcatctacctaatgagatggcc
cactatgctgctgactgttgggatgcagaaatagaatgctcttatggatggatagagtgc
gtgggtattgctgatagatctgcatatgatttgaaagctcactctgagaaaagtggtgtc
ccacttgttgctcatgaaaaattctccaagcctagagaggttgagaaacttgttatagtg
ccctcaaagaaagacctggggctttcttttaagggtaatcaaaagatggtcgttgaagca
ttggaggctatgaatgagaaggaagccttagagatgaaagctgcactagagtctaagggc
gagacaaattttaaagtctgcacacttggaaaggatgtggtgattaccaagaagatggta
tcaattagtatggagaagaagatggagcatcagcgaactttcactccttcggtcatcgaa
ccgtcatttggcattggcaggatcatctactgtttatttgaacattcattttacacaagg
cctagcaagtctgaggaggaacagctgaatgtcttccggttcccccctcttgtggctcct
atcaagtgtaccgtattccccctggtaaagaatcaagagtttgatgctgctgccaaagtg
attgctaaagcattaactgctgctggtatctcacacatcattgacactactgctatttct
attgggaggagatacgcaaggacagatgagattggtgttccttttgcggtaacagttgat
tctgcaacaagcgtgacgatacgggagagggacagtaaagagcaggtccgggttgacatc
aacgaggtgtcatccgtcgtgaggcagctgacagaaggccaaagcacctgggcagatgtt
tctgcgacgtatccctcccatgttggtccccaaggtgaccaggagtga
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