Phragmites australis (common reed): 133898512
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Entry
133898512 CDS
T10575
Name
(RefSeq) LOW QUALITY PROTEIN: preprotein translocase subunit SECY, chloroplastic-like
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
paua Phragmites australis (common reed)
Pathway
paua03060
Protein export
paua04141
Protein processing in endoplasmic reticulum
paua04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
133898512
04141 Protein processing in endoplasmic reticulum
133898512
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133898512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133898512
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
paua02044
]
133898512
Membrane trafficking [BR:
paua04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
133898512
Secretion system [BR:
paua02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
133898512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
TssN
Motif
Other DBs
NCBI-GeneID:
133898512
NCBI-ProteinID:
XP_062195221
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All DBs
Position
18:complement(7344172..7348638)
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AA seq
531 aa
AA seq
DB search
LPPPFAPLRPRPLTRAATASFWLPRRRAAAQGKRISVACSPRCTLETAGPGFDPLGLYKE
GPSRSDSQSPLSYFFGILSPVFGSSSGARKEKTSYGRGAAAAIEDSSIDIGDFFKGPLPG
KFLKLLGYLALSRLGVYIPLGGVNREAFAGNLDQNSLLGTLDSFSGGGIGRLGICSLGIV
PFINAQIVFQLLAQLYPKLQDLLXKEGEAGRKKVLQYTRYASVGFAIVQAIGQVFYLRPY
VNDFSTEWVLTSMTLLTLGSVFTTTIGERISDLKHGNGTSLLIFTSIISYLPASFGKTVA
QAFQDGNYVGLLTIILSFILLVFGIVYVQEAERKIPLNYASRYSSRTGGLQRSAYLPFKV
NSSGVMPIIFSTSSPALPGTLARFTGLEFLKKAAVALNPGGALYLPTNVLLIAFFNYYYT
FLQLDPDDLSEQLKRQGASIPLVRPGKSTAAFIKTVLSRISVLGSAFLAVLAAGPSVVEQ
ISHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDVNRFDQ
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
ctacctcctcccttcgctcccctacggccgcgtcccctaaccagagcagcaaccgcctcc
ttctggctcccgaggcgccgcgctgcagctcaaggaaagcgaatctccgtcgcctgctcc
cccaggtgcacgttggagacggccggccctggcttcgacccgctagggctctacaaggag
ggtccgtcgaggtctgattcccagtctcccttgtcttacttctttggtatcctgtcgccg
gtgttcgggagctccagcggcgccaggaaggagaagacatcctatggccgaggagcagca
gctgcaatcgaggatagttcaattgacattggtgacttcttcaagggccctctacctggg
aagttcctgaagctccttggttatttggccttgtctcggcttggcgtgtatatacccttg
ggtggagtaaaccgggaagcttttgctgggaatcttgatcagaacagcctactgggcact
ttagattctttttccggtggaggtatcggccggcttggaatatgctctcttggcattgtt
ccatttatcaatgcacagattgtgtttcagcttcttgcccagctttacccgaaattgcaa
gaccttctgtgaaaagaaggggaagcaggaagaaaaaaggttcttcagtatacaagatat
gcatctgttggttttgcaattgtccaggctattggacaagttttttatctccgtccttat
gtaaatgacttcagcacagaatgggttctaacatcaatgacattgttgacacttggatca
gtgtttaccaccaccattggtgaaagaatatctgatctgaaacatgggaatggaacatca
cttcttatatttacaagtataatatcgtatttgcctgcatcatttgggaagacagttgca
caggcatttcaagatggaaattatgttggacttctcacaatcatattgtcattcattctc
ttagtttttgggatcgtctatgtccaagaagctgagcggaaaataccactgaattatgct
tctcgatacagcagtcgaactggcggtcttcagcgatctgcatatctaccatttaaggtc
aacagttctggtgtcatgcctatcatattctctacatcttcgccggctttgcctggtaca
ttggcacgattcactggcttagagtttcttaagaaggctgccgtagcccttaatccagga
ggtgctctgtatcttccaactaatgtattacttatagcctttttcaattactattacaca
tttcttcaattggatcctgatgatcttagtgagcaattgaagcggcaaggcgcttcaata
ccgcttgtgcggccaggaaaaagtacagctgcgtttattaaaacagttcttagtcgtata
tctgtcctaggatctgcctttctggctgttctagctgctggaccatctgtggttgaacaa
atatctcacttgacggcattccggggatttgctggaacatcagtgctcatcctagttgga
tgtgcaactgacacagctcggaaagttcaggcagaaataatttctcagaaatataagaac
atcgagttctatgatgtcaaccgttttgaccaatga
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