Phragmites australis (common reed): 133898710
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Entry
133898710 CDS
T10575
Name
(RefSeq) DNA topoisomerase 1 beta-like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paua03032
]
133898710
Enzymes [BR:
paua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
133898710
DNA replication proteins [BR:
paua03032
]
Eukaryotic type
DNA Topoisomerases
133898710
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
133898710
NCBI-ProteinID:
XP_062195370
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Position
18:complement(3647396..3653647)
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AA seq
908 aa
AA seq
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MAVVNPNNPVMFDNDDDDGPISFKRSSNSMKSSRPTPSKPEGSSGNAAAPVRSLKPVAPN
PQKNGVTNTSRPLHLKPQLSSPNHRPSGSGLPNRLAEHSSKINNADKSKLKRPLVKEEQA
DDSDDDTTPIGLRKKVEEKKLKRVDTRGEKADDSDEDHKPLSLKINSSKMPANSTSKAVL
QKTAPKIEQPDDDSDDDKPLASRLPTNAAPKSGGNMSDDSEDEKPLAARFSKVTGNANLK
SGSSNKGLNNDANDPRNFGKRPLDNDNQTSLALKKAKPSNVSASASVKRESKADDNDNMP
LAQRLKMGESSKGKPSAKNVTKKSPASLKKDSKKMKTKMKTKKIMKNSQFSKKLRVPPGS
GGGQKWTTLEHNGVIFPPPYKPHGVKMLYNGQLVDLTPEQEEVATMFAVMKDTDYATKKT
FTENFFNDWRKILGKNHIIKKFELCDFTPIYEWHLREKEKKKQMTSEEKKVLREEKLRQE
EKYMWAVVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIQPSDITINIGKGVPVPEC
PIPGESWKEVKHDNTVTWLAFWNDPISQKDFKYVFLAASSSLKGQSDKEKYEKSRKLKGH
IQKIRDNYTKDFKSRDQTRKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVDNVTC
MPPNNLQFDFLGKDSIRYFNTVEVELLVYKAIEDFRAGKKAGEPLFDKLDTTRLNAHLKD
LMPGLTAKVFRTYNASITLDDILHKETEDGTLLEKIAVYQLANKEVAIICNHQRAVSKSH
DSQMTRMNEKIDELKAQRDELKVDLSKAKKGKPLGNDKDGKPKRNLAPELIEKKIAVAEA
KIEKMEMEKKIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLIAKFGWAM
DVDPEFRF
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgtcaaccctaacaaccctgttatgtttgataatgatgacgatgacggcccg
atttcattcaagaggtcaagcaactccatgaagagcagccgacctaccccctcgaagccg
gagggctcatcaggaaacgctgctgcgcctgtcaggagcttaaaacctgtggctccgaat
ccgcagaagaatggggtgaccaatacttcgaggccactgcatctgaagccgcagttgtct
agcccaaaccatcggccttcgggatctgggctgccaaacaggttggcagaacatagttct
aagatcaacaatgctgataagagtaaacttaaaagacctcttgtgaaagaagagcaggct
gatgattcagatgatgacacaacaccaattgggttaaggaaaaaggtcgaggagaagaaa
ttgaagagagttgatacaaggggtgagaaggcagatgattcagatgaagaccataagcca
ttgagtctcaagatcaactcatccaaaatgcctgccaatagcacgagtaaggctgttttg
cagaaaactgcaccaaaaattgagcagcctgatgacgattcagacgatgataaaccattg
gcaagcaggttgcccactaatgctgctccaaaaagtggaggtaatatgtctgatgattca
gaggacgagaagcctttggctgcccgattttcgaaagttactggcaatgcaaatctaaaa
tcaggttcttcgaacaaggggttaaataatgatgcaaacgacccacgaaattttggtaaa
aggcctctagataatgataatcaaacgagtttagctctcaagaaggcaaagccttcgaat
gtttcagcttctgcaagtgtcaaaagagaatctaaggcagatgacaatgacaacatgcct
cttgcacaaaggctgaaaatgggcgagtcttcaaaaggcaaaccatctgcaaagaatgtc
accaagaagagtcctgcatcattgaagaaggacagcaagaaaatgaaaacgaaaatgaaa
acaaagaagataatgaaaaattctcagttctctaagaaattgagggtccctcctggatct
ggtggtggacagaaatggaccaccttggagcacaatggtgttattttccctcctccatac
aagcctcatggtgtcaaaatgctttacaatgggcaacttgttgatctgacgccagaacaa
gaggaggttgcaacaatgtttgctgtgatgaaagacacagactatgcgaccaagaagaca
ttcaccgagaactttttcaacgactggagaaaaattctcggtaaaaaccatattatcaag
aaatttgagctgtgtgatttcaccccgatatatgaatggcacctcagggagaaggagaag
aagaagcagatgacatcagaggagaaaaaagtattgcgggaagagaaattgagacaagag
gagaagtatatgtgggctgttgtagatggtaaaaaagagaaggtcggcaatttcagagta
gaaccacctggcttgttcaggggacgtggagaacatccaaagatgggaaaactgaagcga
cgcattcaaccaagtgatattacaataaatatcggaaaaggggttccagtccctgagtgt
ccgatacctggagaaagctggaaagaagtcaaacatgacaatactgttacatggctggcc
ttttggaatgatccaattagccaaaaagattttaagtatgttttcctggcagcaagcagt
tcactgaaggggcaaagtgataaagagaaatacgagaagtccagaaaattgaagggtcac
atacaaaaaattcgtgacaattacacgaaggatttcaaaagcagagatcagacaaggaag
caaattgctgtggcaacataccttattgataaactagcccttagggcaggcaacgaaaag
gacgatgatgaagctgacactgttggttgctgtacgctgaaagttgataatgttacttgt
atgcccccaaataatcttcagtttgactttcttggtaaagattctataagatacttcaac
accgtagaggttgaactgctcgtgtacaaggcaattgaggatttccgtgctgggaaaaaa
gcgggagaacctctctttgacaagctcgatacaactaggctaaatgctcacctgaaggac
ctaatgcctgggcttactgcaaaagtgttccgtacatataatgcttccatcaccttggat
gatattttgcacaaagaaacggaagatggaactcttcttgaaaaaattgctgtctatcaa
ctagcaaacaaagaggttgccataatctgtaaccatcagcgtgctgtctcaaaatcacat
gattcccagatgaccagaatgaatgaaaagatcgatgaattaaaggcccagagggatgag
ttgaaagtagacttgagcaaagcaaagaaaggaaagcctctaggcaatgataaagatggg
aagccaaagaggaatttggcgcctgaattgattgaaaagaagattgcagtggctgaagcc
aagatagagaagatggagatggaaaagaagataaaagaggatttaaagacagtagcactt
ggaacgtcaaagatcaactaccttgatcctaggattactgtggcatggtgcaaacgacat
gaagtccctattgaaaagattttcaacaaatcgcttattgcgaaatttggatgggcaatg
gacgtcgacccggaattcagattctag
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