Phragmites australis (common reed): 133898750
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Entry
133898750 CDS
T10575
Name
(RefSeq) peroxisome biogenesis protein 5-like isoform X1
KO
K13342
peroxin-5
Organism
paua Phragmites australis (common reed)
Pathway
paua04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
133898750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133898750
Membrane trafficking [BR:
paua04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133898750
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_11
TPR_2
TPR_16
TPR_17
TPR_8
TPR_14
TPR_CcmH_CycH
TPR_19
TPR_7
TPR_9
TPR_12
PPTA
TPR_20
PsiA
PEX18_PEX21_C
Motif
Other DBs
NCBI-GeneID:
133898750
NCBI-ProteinID:
XP_062195419
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Position
18:24987850..24996383
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AA seq
735 aa
AA seq
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MAMRHLITGQNNCAPDGASSSNPFGALANAVLGQSSKAQSIKELPGAAVSVPSTSEFSTA
APLSTIPGSENEFKQDQRPLARGADFIRGGPANDWVESFRPPGLPEFGGAGSQFAEFEQI
YNNTGTTFGPPLDGPPQRVLSGVLHSFLASGRAGVPFQPVPVPALGLSESDKQCIRDRSC
IMARHILADQPEEYIQAQVNTLLHSLDIDNRMRGPMHGTYPELEEYWNQSQSAMRSAPMH
NAADKWITEFGKQNNNPEDWAHSFEQQYGPNGWASEFEQHQSQMAMGQMGGANMANLAAM
EQSRMLAQTLASNNDPKFQNSKFFQFVSKMSRGELIIEDNQVKQGSASQSSGWADEFQTQ
YNANANSWADQFVHEELSQGADKWVSEFSSEHNQGGLNENWIDEFSKLNVTDEWAEEFSG
GGFGESSADPWVDEFQEQLSASKQSSGASRGVYVFSETNPYVGHPNPMQEGQDLFRKGLL
SEAVLALEAEVLKNPDNAEGWRLLGITHAENDDDKQAIAAMMRAQEANPTNLEVLLALGV
SHTNELEQGEALRYLYRWLQNHPKYGGLAPPQSTDSPYGPDVVKLFNEAAQMSPEDADVH
IVLGVLYNLSREYDKAIASFKTALQLKPQDYSLWNKLGATQANSIQSAEAILAYQQALDL
KPNYVRAWANMGISYANQGLYEDSIRYYVRAVSMNPKADNAWQYLRISLSNASRADMIAA
CDSRNLDVLQKEFPL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgtcacctcatcacgggccagaacaactgcgccccggacggcgcgtcgtcg
tccaatcccttcggcgccctcgccaacgccgtcctcggccagtcctccaaggcgcagtca
ataaaggaacttcctggcgctgctgttagtgttccatcaacatctgaatttagcacagct
gctcccttgtcaaccatccctggttcagagaatgagtttaaacaagatcaacgacctctc
gcacggggtgccgacttcattcgtgggggtcctgcgaatgactgggtcgaatcttttcgg
cctccggggcttcctgaatttggaggagctggatcccaatttgcagaatttgagcaaatt
tataataatacagggacaacctttggaccacccttggatggtccgccacaaagggtgttg
tctggtgttttgcattcttttcttgcaagtggccgagctggtgtgccgtttcaacctgtt
ccagtaccagctcttggtttatctgaaagtgacaaacaatgcatacgtgatcgtagctgc
ataatggcacggcatattttggctgaccaaccggaagaatatatacaagcccaggtcaac
acattgctgcattcacttgatattgacaaccgaatgagaggccccatgcatggaacatac
ccagagctggaggagtactggaatcagtcccaaagtgctatgagatctgccccaatgcat
aatgctgcagataaatggattaccgagttcggcaagcaaaataataacccagaagattgg
gcacactctttcgagcagcaatatggtcccaatggttgggcctccgagtttgaacagcat
caatctcagatggccatgggtcagatgggaggagcaaacatggccaaccttgctgctatg
gagcaatcacgtatgcttgcacaaacattagcaagcaataatgatccaaagtttcagaat
tctaagttcttccagtttgtttcaaagatgagccgcggtgaacttattatagaagataat
caagtaaaacaaggttcagcatcccaatccagtggctgggctgatgaatttcaaacacag
tacaatgctaatgcaaactcatgggcggatcagtttgtgcatgaagagctttcacaaggg
gcagataagtgggttagcgagttctctagtgaacataatcagggcgggctaaatgagaac
tggattgatgagttctcgaaattaaatgtcactgatgaatgggcagaggagttcagtgga
ggaggttttggtgaaagctctgctgatccatgggtagatgagttccaggaacaactgtca
gcctccaaacaaagttcgggtgcttctcgaggagtttatgttttttctgagacaaacccg
tatgttggtcaccctaatccaatgcaggaaggacaggatctcttccgcaagggcctctta
agtgaagctgttcttgctttagaggctgaagttttgaagaatcctgataatgctgaaggt
tggaggttgcttggaataacacatgcagaaaatgatgatgacaaacaggccattgcagca
atgatgcgggcgcaagaagctaatccgacaaacctggaagttcttctcgctcttggtgtc
agtcacacaaacgaattggagcagggagaagcattaagatatctttataggtggcttcag
aatcatccaaaatatgggggccttgcccctccacaatcaactgattcaccttatggtcca
gatgttgttaaattgtttaatgaagctgctcagatgtcacctgaagatgctgatgtccat
atagttctgggagttttatacaacctatcaagagaatacgataaagctatagcttcattt
aagacagcactacagctcaaaccacaggactattcgctctggaacaagcttggtgctacc
caagcaaacagcatccagagtgctgaagcaatattggcgtatcagcaggctctagacttg
aaacccaactatgtgcgtgcatgggctaatatgggaattagctatgccaaccagggtttg
tacgaggattctattcgatactatgtaagggcagtttccatgaatccaaaagcagacaat
gcctggcagtacttgaggatttctcttagtaatgcttcacgagctgacatgattgctgca
tgcgattctcgcaaccttgatgttcttcagaaagagtttcctctgtga
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