Phragmites australis (common reed): 133898771
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Entry
133898771 CDS
T10575
Name
(RefSeq) peroxisomal ATPase PEX1-like
KO
K13338
peroxin-1
Organism
paua Phragmites australis (common reed)
Pathway
paua04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
133898771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133898771
Membrane trafficking [BR:
paua04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
133898771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_16
AAA_lid_3
ATPase_2
AAA_14
AAA_22
AAA_5
DUF815
ORC-CDC6-like
Bac_DnaA
RuvB_N
nSTAND3
RNA_helicase
NPHP3_N
AAA_7
AAA_19
TsaE
IstB_IS21
AAA_28
Mg_chelatase
AAA_33
RNA12
bpMoxR
AAA_11
Rad17
AAA_lid_PRS2_C
Motif
Other DBs
NCBI-GeneID:
133898771
NCBI-ProteinID:
XP_062195469
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All DBs
Position
18:28076489..28085170
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AA seq
1094 aa
AA seq
DB search
MSGGGMEVEVRVVGGARSCFVALPLHLIHALERTSASGDLPPVLALDLRAAVGGRWSLAW
SGAASRSRAIEVAQELAECISLPDGTIAQLSVARSLAKADSVSIEPFGEDDWEILESRAD
LAEETILKQVGIVYEGMKFPLWLDGHNIVKFIVVSSCPEKSVVQLVPGTEVAVAPKKRKE
KSSHDVQKQTALKEQVNIKALLRVQAADRKYAHTFKYKGADIGVVLSYAVLIHPDTATSI
SLGNLQLITVSPKSSKKGLAQQSKEVAQKKGISVAKERTQEAVVYTLLSDSVAKGHVMLP
YSIRHFISADVHSWVYIRTYSASIKKDEPVVTISPLRFKMHVKDAHDNSGLGSQEADTSR
ITRIPSENSNIFQEAHYGENEDLQGADVESSPESMSKQKFFIKHWLIGQLKEMSLHVGHT
EISSIVLPTKILLHFEATDQKINRGVEFLYLLAATSENSGFNNSQVDVETAWSAPIDDPE
NLELHFGKLELGEPVSFDSIMDGGVSDGFKLTRSSLGWMENAMSDVTKRLSVLLSSTSLR
LFNRLKFPFPGHVLVYGPRGSGKTALTRASAKYFEDHNEILAHVIYIECSKLALGKAKET
RQTIEDSISEALLHSPSIIIFDDLDSVISVSSDPQVSQSSSSSDSLVRYLADIMDEYKDK
TRNACGYGPIALMASVQSLQSLPQDLTTSGRFDFHIELPALAVPERKALLKHQVEEHDLQ
SSEEVLSEIASKCEGYDAYDLEILVDRAVHAAASRFVLPPNASLNSVKPTLVMEDFLKAM
HGFLPVAMRDLRKYAPDDKDSGWEDVGGLNEAVTIIKETLELPSKYPNIFTRAPVRLRSN
ILLYGPPGCGKTHIVRAAAAACSLRFISVKGPELLNKYIGSSEQSVRDFFAKAVAAAPCL
LFFDEFDSIAPQRGTHSAGVSDRVVNQFLTELDGVETLTGVFVFAATSKPQLIDAALLRP
GRFDRLVFCDFPRWDERLEILKVHARMVSLASDASLEDLASLTEGFTGADLAAILTDAGL
AAVHELLDSRENGIPEREPCISKELLMSVARKARPSTPADEKRRYDKEFGEFVSSRKSIS
TKARESKGKKVTLA
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcggcgggatggaggtggaagtgcgcgtggtgggcggcgcccggagctgcttc
gttgcgcttccgctccacctcatccacgccctggaacgcacctccgcctccggcgacctc
ccgcccgtcctcgcgctcgacctccgcgcggccgtcggtggccgctggtccctcgcctgg
tccggcgccgcgtcccgatcccgcgccatcgaggttgcacaagagttggcagagtgcatt
tcactgcctgacggaacaatagcacagttgagcgtagctcgctctctagccaaagctgac
tcggtcagtatagaacccttcggtgaggatgattgggagatactggagagccgtgctgat
ttggctgaagaaacaatcttgaagcaggtcggtatcgtttacgagggcatgaaattccca
ttgtggttggatggtcataatattgtgaagtttattgtggtgtcatcttgccccgagaag
tcagttgttcaacttgtgccaggaactgaagttgctgttgcacccaaaaaacgcaaagag
aagtcttctcacgatgtgcaaaagcagactgcactgaaggaacaagtcaatataaaggca
ctcctgcgtgttcaagcagcggacaggaagtatgcacatacgttcaaatataaaggtgct
gacataggggtggttctcagctatgctgtgctaatacatcctgatacagctacaagtatt
tcgcttggcaatctccaattgatcactgtttcacctaaatcatcaaagaaggggcttgct
caacaaagcaaagaagttgcacaaaagaagggaatttcagtagctaaagaaaggacccaa
gaagctgttgtttataccttactctcagactctgttgccaaagggcatgttatgcttccc
tactctattcgtcacttcataagtgctgatgtacattcatgggtatacattaggacatac
tcagccagtatcaagaaggatgagcctgtagtgacaatatctcctttacggttcaagatg
catgtgaaagatgcccatgataacagtggattaggcagtcaggaagcggacacttcaagg
ataaccaggattccttcagaaaatagtaatatcttccaggaagctcattacggtgaaaat
gaagatcttcagggtgcagatgttgagagcagccctgaatccatgtcaaaacagaagttt
tttattaaacattggcttatcggacaacttaaagaaatgagtttacatgttggccatacc
gagataagttcaatagttttaccaaccaaaattttgctccattttgaagcaacagatcaa
aaaataaacagaggagttgaattcctatacctgctagcagctacttctgaaaattctgga
ttcaacaattcacaagttgatgttgagactgcttggagtgctccaatcgatgatccagaa
aatctggaactgcatttcgggaagttggagctgggcgagcctgtatcttttgattccata
atggatggtggggtcagcgatggtttcaagctgacacgatcttctttaggctggatggag
aatgcaatgtcagatgtgacaaaaaggttatctgtgctcttatcatcaactagcctgagg
ttatttaacaggctaaagttcccctttcctggacatgttcttgtctatgggcctcgaggt
tcagggaaaactgctttgactagggcttctgcaaaatactttgaagaccataacgagatc
ttggcacacgtaatatacatagaatgttccaaacttgcacttggcaaggctaaagagaca
aggcaaacaattgaagacagcatttctgaggcgctgcttcattcaccttcgatcatcata
tttgatgatctagacagtgtaatttcagtctcttcagatcctcaagtgtctcaatcgtcc
agttcttctgattctctagtacggtatttggctgacattatggatgagtacaaggataag
actcggaatgcatgtgggtatggacctatcgcattgatggcttcagttcaatcacttcag
agtcttcctcaagacttaaccacttcagggagatttgatttccatattgagcttcctgct
cttgcagtcccagagcgcaaagcactattaaaacatcaagttgaggagcatgatctacag
agttctgaggaagttctatcagagatagcatcaaaatgtgaaggttatgatgcatatgac
ttggaaattttggttgatagggctgtgcacgctgctgcttctcgctttgttctgcctcct
aatgcctctctgaactctgtgaaaccaactttggtgatggaagatttcttgaaagcaatg
catggattccttccagtcgccatgcgtgatcttaggaaatatgctcctgatgataaagat
agtggttgggaagatgttggagggctaaatgaagcagtaactattattaaagagactctt
gaattgccatcaaaatacccaaatatctttaccagggcaccagtacggttgcgatcaaac
attctcctctatggaccacctggatgtggcaaaactcacattgtgagagctgcagctgca
gcttgttctttgcgattcatttctgtcaagggaccagagctattgaataagtatatcggt
tcatctgagcaatctgttcgtgacttttttgcaaaggcagttgcagcagcaccttgcctg
ctattctttgatgaatttgattccattgcaccccagcgaggaacccatagtgcaggagtt
tctgatcgtgttgttaatcagttcttgacagaactagatggtgtggaaaccttgactgga
gtatttgtatttgcggctacgagcaagccacaactaattgatgctgcactcttgcggcct
ggaaggtttgatcgtctagtcttttgtgatttccctcgatgggatgaacgtttggaaatt
ctgaaggtgcatgctaggatggtttcgctggcaagtgatgccagtctggaagatcttgct
tctctgactgaaggatttactggtgctgatctcgcggctattctaacagatgctgggttg
gcagcagttcatgaacttttggacagccgagagaatggtatcccagaaagagagccgtgc
atcagcaaagaacttctcatgtctgttgctaggaaggctagaccttctacaccagcagat
gagaagaggcggtatgataaggagtttggtgaatttgtgtcatccaggaagtctatttcc
acaaaggcaagagagtcaaaaggcaaaaaggtcacattagcttga
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