Phragmites australis (common reed): 133898797
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Entry
133898797 CDS
T10575
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133898797
Transcription factors [BR:
paua03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133898797
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2H2_4
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
133898797
NCBI-ProteinID:
XP_062195520
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Position
18:complement(28004397..28009907)
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AA seq
542 aa
AA seq
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MAAASSAHLFGLGDAQMQPPPPPPQQAAPPPPAQNPATPAPKKKRNQPGNPTDPDAEVIA
LSPKTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKETRRRVYLCPEPTC
VHHDPSRALGDLTGIKKHYCRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYRCDCG
TLFSRRDSFITHRAFCDALAQESARVPPISAGMYGSGGMTLGLCGMTAPQLQSFQAHAHS
SATTAISGNPAAQFEHLMASSTGSPAFRGAQPASSSSSPFYLGGAEDGQGQPGHTSLLHG
KPTFHGLMQLPEQHQPGSNGLLNLGFFSGASSGQDARLVFPDQFNGSAPGAGNGRGDGGE
HGNSSANTESAAIFSGNLMGNQMGGGTGFSSSLYNSSETVAPPQMSATALLQKAAQMGAT
TSGGGGGSVNSLLRGLGSGGALNGRPAGAAGFMAGERLSRSTSQAENESQFRDLMNTLAA
SGNGAGAAFRGGFPGVDDSKLSTRDFLGVGGGVVRSLNGAAGLPLRHGAAGIGMGSLDPE
MK
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcctcttctgcacacttgttcggactcggcgacgcgcagatgcagccaccg
ccaccgccaccgcagcaggcggcgcctcctcctcctgcgcagaaccccgccacgccggcc
cccaagaagaagaggaatcagcccggcaatccaacagatcccgatgcggaggtgatcgcg
ctgtcccccaagacgctgatggcgaccaaccggttcgtgtgcgaggtgtgcaacaagggt
ttccagcgggagcagaacctgcagctgcaccggcgcgggcacaacctgccgtggaagctg
aagcagaagaaccccaaggagacgcggcggcgggtgtacctgtgcccggagccgacgtgc
gtgcaccacgacccgtcgcgtgcgctcggcgacctcaccgggatcaagaagcactactgc
cgcaagcacggcgagaagaaatggaagtgcgacaagtgcaacaagcgctatgccgtgcag
tccgactggaaggcgcactccaagacctgcggcacgcgcgagtaccgatgcgactgtggc
acgctcttctcgaggagggacagcttcatcacccaccgtgcgttctgcgacgcactggcg
caggagagcgcacgggtgccgcctatcagcgctggcatgtacggctccggcggcatgacc
ctcggcctctgcgggatgaccgccccccagctgcaatccttccaagcccatgcccactcc
tcggccaccaccgccatcagcggcaatccggcggcgcagttcgagcacctcatggcgtcc
tccaccggatcccccgcgttccgcggcgcgcagccggcgtcatcgtcctcctcgccgttc
tatctagggggtgccgaggacggacaaggccaacccggccacacctctctgctgcacggc
aaaccgaccttccacggcctgatgcagctgccggagcagcaccagccggggagcaacggc
ctcctgaacttggggttcttctcgggcgcgagcagcggccaggacgcgcgcctcgtcttc
ccggaccagttcaacggttccgctcccggggccgggaatggccgcggcgatggcggcgag
cacggcaacagcagcgccaacaccgagtcggcggccatcttctcggggaacctaatgggc
aaccaaatgggaggcggcaccggcttctcttcttccttgtacaactcgtcagagaccgtc
gcgccgccgcagatgtcggcgacagccctgttgcagaaggccgctcagatgggcgcgacg
acgagcggcggcggaggcggcagcgtgaactcgctgctcagggggctcggtagcggcggc
gctttgaacgggagacctgccggagcagcagggttcatggcaggggagagattatcgagg
agcacttctcaggcggagaacgagagccagttccgggacctgatgaacacgctcgcggct
tccgggaacggagccggcgcagcgttcagaggtggcttccctggcgtggacgacagcaag
ctgagcacgagggacttccttggcgtcggtggcggcgttgtgcggagcttgaacggcgcg
gcggggctgcctctgaggcacggcgccgcgggcattggcatgggctcattggacccagaa
atgaagtag
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