Phragmites australis (common reed): 133898851
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Entry
133898851 CDS
T10575
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133898851
Spliceosome [BR:
paua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
133898851
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Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
RRM_10
RBD_AKAP-17A
DUF8400
DUF4523
Motif
Other DBs
NCBI-GeneID:
133898851
NCBI-ProteinID:
XP_062195622
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All DBs
Position
18:19631473..19637398
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AA seq
460 aa
AA seq
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MPSGSATQFRYTQTPSKVLHLRNMPWECTEEELVELCKPFGRVVNTMCNVGANRNQAFVE
FADQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLVTFEGVQ
PNDVTIEVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPKYLL
PEHIIACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIMQPTVGPDGKIKEP
ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAMFEKNGGMQALIQYPDISTAAVAKQ
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAHDERSKDYTISDPHAQLQAAAQAPALSTPGV
AWQNTAPAASFYASTAGPTPVGQVPAWNPNMQAGAFASSSTTYPSQPLMANSIRHYPAVG
SSSGGPPVSFQASQQMPQYGIPPGAPPHAPPAGQPMYFPK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcggggtcggcgacgcagttccggtacacgcagacgccgtccaaggtgctgcac
ctgcggaacatgccgtgggagtgcaccgaggaggagctagtcgagctctgcaagcccttc
ggcagggtcgtcaacactatgtgcaacgtcggcgcaaaccgcaaccaggccttcgtcgag
ttcgcggatcaaaaccaggcaatttcaatggtttcatattatgcttcatcttcagagcct
gctcaagttcgtggtaaaactgtatatatccagtattcaaacaggcaagaaattaccaat
aataagggcactggtgattcttctggcaatgtcctgcttgtcacttttgaaggtgttcaa
cctaatgatgttaccattgaagtcattcatttggtattttcggcatttgggtttgttcac
aagatcgctactttcgagaaagcagctggtttccaggcgcttatccagtatactgatgct
ccaactgctcttgaagcgaaaaactcattggatggaagaagcatcccaaaatatttactt
ccagaacatatcattgcctgccacatgcgcataaccttttctgcgcataaggatttgaat
atcaaatttcagtcacatcgcagcagggattacaccaatccttatcttcctgtgaaccaa
accgcaattgaggggattatgcagcccacagtaggccctgatgggaagataaaggagcct
gagagcaatgtccttttagcctcaattgaaaacatgcagtatgctgtgacagtggatgtt
ctacacactgtgttctctgcttttggcactgttcaaaaaattgcaatgtttgagaagaat
ggtggaatgcaggctctaattcaatatccagatatttcaactgcagcagttgctaagcaa
gctttggagggacactgcatatatgatggtggttactgtaagcttcatctgtcatactct
cgtcatactgatctcaatgtaaaggctcatgatgagagaagcaaagactacaccatctca
gaccctcatgcgcaactgcaagctgctgctcaagcgccagctctaagcactcctggagtg
gcatggcagaacactgcaccggctgcttcgttttatgcaagcacagcaggaccaactcct
gttggacaagtgccggcttggaatcctaacatgcaggcaggggcttttgcatcttcatca
accacatacccaagccaaccattgatggcaaactccattcgtcactatcctgctgttgga
tccagttccggtggcccaccagtatcatttcaggcctcacagcagatgccacaatatggc
atcccccctggtgctccgcctcatgcaccaccagctggccaaccaatgtacttcccgaaa
taa
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