KEGG   Phragmites australis (common reed): 133898956
Entry
133898956         CDS       T10575                                 
Name
(RefSeq) elongator complex protein 2-like
  KO
K11374  elongator complex protein 2
Organism
paua  Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:paua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:paua03016]
    133898956
Transfer RNA biogenesis [BR:paua03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    133898956
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 EIF3I Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR41 NBCH_WD40 WD40_MABP1-WDR62_1st WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_LRRK2 WD40_Gbeta Beta-prop_HPS5 PAS_PdeA
Other DBs
NCBI-GeneID: 133898956
NCBI-ProteinID: XP_062195780
LinkDB
Position
18:24647972..24652799
AA seq 837 aa
MPPAAGVEVERVFVGAGCNRVVNNVSWGACGLVAFGAHNAVALFSPLRGEIVTTLPGHKA
AVNCTLWLPTKKDVLQVRGRETHYLLSGSADGTIMAWKIGSGKGEWAHALQLPGMHKKGV
TCFAGRMVSDTVSIFASTSSDGIVVIWEMAIEPTTGGSCKVSCLHSLSIGSKPMVSLSLA
VLPEQGSHLILAMGGLDHKIHIYCGDKSGKFIKACELKGHSDWIRSLDFSLPVMMSSEKH
NLFLVSSSQDRTIRIWKMTSEAVSAGSTVQLRKGNIEMTSYIEGPLFVAGNTSYQVSLES
LLVGHEDWVYSVEWQPPTLLPGDGAHQPMSILSASMDKMMMIWRPEKNTGLWINLVTVGE
LSHSALGFYGGHWQPDGKSILAHSYGGSFHMWRDVGLDSENWQPQIVPSGHFAPVSDLTW
ARSGQYLLSVSHDQTTRIFAPWRSQVNPGDVIYWREIARPQIHGHDINCVAFIQGSGNHR
FVIGADEKVSRVFEAPLSFLKTLQQATLLKPDISEDFDNVQVLGANMSALGLSQKPIYTH
GVKESPSSVSSDGPGSMETIPDAVPTVFTEPPVEDQLAWNTLWPESHKLYGHGNELFSIC
CDYEGKLVASSCKAQSASVAEIWLWEVGTWKAVGRLQSHNLTVTQMEFSSDNAFLLSVSR
DRHLSVSSIRRTEEGTEHHLVAKHEAHKRIIWACSWNPFGSEFATGSRDKTVKIWCVQDE
SSVKLLATLPQFRDSVTALAWMGRDRASNAGILAVGMDNGLIELWSISGRRTAASSTPDS
SPLSAACMLQFDPLLCHLSTVHRLRWQKPDSSDEKSAPELASCGADHCVRVFEVRGK
NT seq 2514 nt   +upstreamnt  +downstreamnt
atgcctccggcggccggtgtggaggtggagagggtcttcgtaggcgctggatgcaaccgc
gtggtgaacaacgtctcatggggcgcctgcggcctcgtcgccttcggcgcccataatgcc
gtcgccctcttctctcccctgagaggtgagatcgtcacaactcttccggggcacaaggcg
gcagtgaactgcacgttatggcttcccacgaagaaggatgtgctccaagttcgcggcagg
gagacacactatctgctctcagggagtgctgatggtactatcatggcatggaagattggt
tctggcaagggagagtgggctcatgcgttgcaactgccagggatgcataagaaaggggtc
acctgttttgctggaaggatggtgtcggatactgtttcaatttttgcttccacttcctcg
gatggtattgtggttatttgggaaatggcgattgagcccaccactggtggaagctgcaaa
gtgtcttgcctgcattctctatccattggctcaaaaccaatggtttcactttcattagcc
gtgctaccggaacagggaagccatctaattttggcaatgggtggtttagatcacaagatc
cacatttattgcggggataagtcaggcaagttcattaaagcctgtgagcttaaaggtcat
tctgattggatcagaagtttagacttttctttacccgtgatgatgagcagtgaaaaacac
aaccttttcctcgttagctcgtctcaggacagaaccattcggatatggaaaatgacttca
gaagctgtttctgctggctccacggtgcagttgaggaagggaaatattgagatgacctcc
tatattgaaggacctctatttgtggctggtaatacaagttaccaagtatcattggaatct
cttcttgttgggcatgaggattgggtatattccgttgagtggcagccacctacactgtta
cctggggatggagctcatcagccaatgagcatattatctgcatccatggacaagatgatg
atgatatggaggccagagaaaaatactggcctttggatcaatttggtgactgttggtgaa
ttaagccactcagcacttggattttatggtggacactggcagcctgatggaaaatccatt
cttgcacatagctatggtggatcctttcatatgtggagagatgttggactggattctgaa
aattggcaacctcaaatagtcccgtctggtcattttgcacctgtgtctgacttaacatgg
gcgaggtctggccaatatttgctatcagttagccatgaccagacaacacgcatatttgct
ccttggagaagtcaagttaaccctggagatgtgatatattggcgtgaaatcgctcgtccg
caaattcatgggcacgatattaactgtgtggcgttcattcagggtagtgggaaccaccgt
ttcgttattggtgctgatgaaaaggtctccagagtctttgaagctcccttatcatttctg
aagaccctacaacaagcaactttgttgaaacctgacatctctgaggattttgataatgtg
caagtccttggagcaaatatgtccgctcttgggctttcgcaaaaacccatatatacacat
ggagtcaaggaatccccaagcagtgtttctagtgatggtccaggttctatggaaaccatt
cctgatgcagtgcctactgtatttactgagccccctgtggaggaccaacttgcatggaat
actctatggcctgaatcgcacaaactatatggtcacggaaacgagctcttctcgatctgc
tgtgattatgaagggaagcttgttgcatcatcttgcaaggctcaatcagcgtcagttgct
gagatctggctctgggaggttggaacatggaaagctgttggtcgcttgcagtctcacaat
ttgacagtgacacaaatggaattctctagtgataatgcttttcttttgagtgtctcaagg
gatcgccatttgtctgtctcttcaatcaggagaactgaggaaggaacagagcatcatctg
gttgcaaagcatgaagcacacaaaagaattatatgggcgtgctcatggaaccccttcggt
tctgaatttgcaactggatcaagggacaagactgtcaagatatggtgtgttcaagatgaa
tcttctgtcaagctacttgcaactttgccgcagttccgtgacagtgtcacagcattggcg
tggatgggccgtgaccgtgcatctaatgctggtattcttgctgttggcatggataatgga
ttgatcgagctctggagtatttcaggtagaagaactgctgcaagcagtactccagattca
tctccacttagtgctgcatgcatgctccaatttgaccctctgttgtgtcacctttcaact
gtgcaccgtttacggtggcagaaacctgactcatccgatgagaaatcagcacctgagctg
gcttcttgtggagctgatcactgtgtaagggtgtttgaggtccgtggcaaatga

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