Phragmites australis (common reed): 133899015
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Entry
133899015 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133899015
KO
K03504
DNA polymerase delta subunit 3
Organism
paua Phragmites australis (common reed)
Pathway
paua03030
DNA replication
paua03410
Base excision repair
paua03420
Nucleotide excision repair
paua03430
Mismatch repair
paua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133899015
03410 Base excision repair
133899015
03420 Nucleotide excision repair
133899015
03430 Mismatch repair
133899015
03440 Homologous recombination
133899015
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
paua01009
]
133899015
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paua03032
]
133899015
03400 DNA repair and recombination proteins [BR:
paua03400
]
133899015
Protein phosphatases and associated proteins [BR:
paua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133899015
DNA replication proteins [BR:
paua03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
133899015
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
133899015
MMR (mismatch excision repair)
DNA polymerase delta complex
133899015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
133899015
NCBI-ProteinID:
XP_062195877
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Position
2:complement(10171208..10175946)
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AA seq
517 aa
AA seq
DB search
MAAAAADQALLDLLPRIHALFSDPLRVISYKWLSRNFSVSSNDAKRLLQEFVNKHGTDLK
VIYSVSGWLKNNPQNYCVKLTSGPKLEETRQEFRDSCSVQVYSIQACIPKDTAVLWNPEF
VQAEELFNQPFDEDNCLRDNRFCAVLNSFVKRTSSGKHVSTLPPKPINSATAAAQSKPSI
TPKEQFVTARQQDMPGPSSPKQVTGNKAEKDNTAALDKDGNASVAKEPSIAVHASKNKAQ
NGKAQTGNGGSLATMWGRASAKPKPPTTTNSRAVASVAATADAQICAKEEAGVDSSDDEQ
GIKYKRGSNGANNRKRRAVFDFSDDEEEDIIVSIASPELPVQLAPNPVTEAAEDTKANQN
NSENKQDKPNSVKDCSVGMDSDFTSECKNESANAMNHSGITLKEKSSDPPINDNKQDQTA
EPASTSPKRRKVLKTRIDERGREVTEVVWEGEASASDKAETNVSNTDAGRRATPLPSKPQ
PAANTGKSKGSSKTAGSKKPAKAGTNQGNIMSFFKKK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgccgccgccgaccaagcgctgctcgacctgctgccccggatccacgccctc
ttctccgacccgcttcgcgtgatttcgtacaaatggcttagtcggaatttctctgtatca
tcaaatgatgccaagaggttgcttcaggagttcgtcaacaaacatggaaccgacctcaaa
gtgatttatagtgtgtctgggtggttgaagaacaatccccaaaattattgtgtaaaactc
acttcaggcccaaaacttgaagaaacaaggcaagaattcagagattcttgttcggttcag
gtctacagtatacaggcttgtattccaaaagataccgctgtactttggaatcctgaattt
gtgcaggcagaggagcttttcaaccagccatttgatgaagacaattgtttgagagacaat
aggttttgtgcggttttgaattcttttgtcaagcgaacttccagtgggaagcatgtgagt
acattgccaccaaagcctataaatagtgctactgcagccgcacaatcaaaacctagtatt
actccaaaggagcagtttgttacagctcggcagcaagatatgcctggaccgtctagtcca
aagcaggtaacaggcaataaggctgagaaggataataccgcagctttagataaagatggc
aatgcttctgtcgccaaagaaccgtcaattgctgtccatgcaagcaaaaacaaagctcag
aacggaaaagctcagaccggcaatgggggatctctggctaccatgtggggccgtgcatca
gcaaaacccaagcctccaacaaccactaattctagagctgtagcaagtgttgctgctaca
gctgatgcacagatatgtgcaaaggaagaagcaggtgttgatagcagtgatgacgaacaa
ggtataaagtacaagaggggttctaatggagcaaataatagaaagagaagagcagtattt
gatttttcagatgatgaggaagaggacattattgtaagcattgcatctcctgagctgcct
gtacagcttgccccaaatcctgttactgaagctgctgaagacactaaagcaaatcaaaat
aactcggaaaataaacaggataaaccgaacagtgtgaaagactgctcagtagggatggat
tctgactttacttctgaatgtaaaaacgaaagtgccaacgctatgaaccactccggaatt
accttaaaagaaaagagcagtgatcctccaatcaatgataataagcaggatcaaactgct
gagcctgcttcaacctcaccaaaaagaaggaaagttttgaagacacgcatagatgagcgg
ggaagggaagttactgaggttgtctgggagggtgaagcttctgccagcgataaggcagag
acgaatgtgagcaatactgatgctggaaggagggcaacacctcttccaagcaagccacag
ccagcagccaacactggcaaaagcaaaggttcgagtaaaacagcaggcagcaagaaacct
gcgaaggctggtaccaatcaagggaacattatgtcattcttcaagaagaaatag
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