KEGG   Phragmites australis (common reed): 133899029
Entry
133899029         CDS       T10575                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
paua  Phragmites australis (common reed)
Pathway
paua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133899029
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:paua03041]
    133899029
Spliceosome [BR:paua03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    133899029
 Complex B
    133899029
 Complex C
   U2 SnRNP specific factors
    133899029
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 133899029
NCBI-ProteinID: XP_062195905
LinkDB
Position
2:10227322..10231881
AA seq 793 aa
MGNPILTLPAPEGDGDGGGDTDHQQQPPPPPPSPGAKAEAPATVATHTRTIGIIHPPPDI
RVIIEKTATFVAKNGPEFERRIISHNQGNAKFNFLQPSDPYHAYYQHRVSELAAAPPGAD
APTGGEPDGADSAAPVAAAPDPANGTAQADGAAAADAKPDHSAPFRVPPPTKVLVPPKAE
LYTVRLPEGITGEELDIIKLTAQFVARNGKSFLTSLAQRESNNVQFHFIRPTHSMFPFFT
SLTDAYSRVLRPEPALLKELREGSKDLTTVLERCLNRLEWDRSQEHARQQAEDEIEQERM
QMSMIDWHDFVVVETIELADDEYEGLPVPLTLEELKRRKRMANLGKEEAMELAEPAKEVE
MEMDEEEMQLVEEGMRATLLEENEGGAQVKVAGDEEAPMRIVKNYKRPEERIPAERDPTK
FVVSPITGELIPISEMEEHMRISLIDPKYKEQKERMLAKIKETTLAPDDEISRNIVGLAR
TRPDIFGTTEEEVSNAVKAEIEKKKDEQPKQVIWDGHSGSIGRTATEALAVGREDQVDSS
NVDGRHIPGPAPLVRPGMPLPRPPQPLPLVNVPRFIAPNAPQYSHMHGVPQMMPPMHPPP
QQIPGQPPMIRMPGQMGHMPTTIPPPPGQAQFMPGPPRPFHMPPPQHMPPMINPIGIPQP
PAPPLPPQPPAEEQPPPPDEPDPKRQRTDDASLIPAEQFLAQHLGPARISVSVPNLDEGN
LRGQVLEISVQSLSDTVGSLKEQIAGELQLPANKQKLSVRTSFLKDNLTLAYYNVGPGVV
INLTLRERGGRKK
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgggcaaccccatcctgaccctccccgcgcccgagggagacggcgacgggggcggcgac
accgaccaccagcagcagcctccgcctcccccaccctctcccggcgcgaaggcggaagcc
ccggcgacggtggccacccacacgcgcaccatcggcatcatccacccgccacccgacatc
cgcgtgatcatagagaagacggccacctttgtcgccaagaacgggcccgagttcgagcgc
cgcatcatctcccacaaccagggcaacgccaagttcaacttcctccagccctccgacccc
taccacgcctactaccagcaccgcgtctccgagctcgccgccgcgccgccaggcgccgac
gcgcccacgggcggtgagcccgacggcgccgactccgcggcccccgttgccgcggcgccg
gacccggccaatggcacagcgcaggccgacggcgccgctgcagcggacgcaaagcccgac
cactccgcgcccttccgcgtgccgccgccaaccaaggtgctggtgccgcccaaggcggag
ctttacacggtgcggctgcccgaggggatcacaggggaggagctggacatcatcaagctg
accgcgcagttcgtggcgcggaacgggaagagcttcctgacgagcctggcgcagcgcgag
agcaacaacgtgcagttccacttcatccggcccacacacagcatgttcccgttcttcacg
tcgctcacagacgcgtactccagggtgctgaggccggagcctgcgctgctgaaggagctg
agggaggggtcgaaggacctgacaacagtgctggagagatgcctgaaccggctggagtgg
gatcggtcacaggagcatgctaggcagcaggccgaggacgagattgagcaggagaggatg
cagatgtcaatgattgattggcatgattttgttgttgtcgagacaatcgagcttgcagat
gatgagtacgaggggcttcctgtgccacttactctagaggagttgaagcgccggaagagg
atggcgaacttgggaaaggaggaagctatggaattggctgaaccagctaaggaggttgag
atggagatggatgaggaggagatgcaacttgtcgaggaaggaatgcgggcaacgctactt
gaggagaatgaaggaggagcacaagttaaggtggctggtgatgaggaggcgcctatgagg
atagtcaagaactacaagaggcctgaggagaggattcctgcagagagggacccaaccaag
ttcgttgtctcaccgataactggggagctgattcccatcagtgagatggaggaacacatg
cgcatctcactcattgaccctaagtacaaggagcagaaagagaggatgttggccaagatt
aaggaaaccaccctcgcccccgatgacgagatttctcggaacattgttggtcttgctcgc
actcgcccagatatttttgggaccactgaggaggaggtttctaatgctgtcaaggctgaa
attgagaagaaaaaggatgagcagccgaagcaggttatttgggacggtcattctggtagc
attggtcggactgccactgaagcattggctgtgggtcgtgaggatcaggttgattcttca
aatgttgatgggaggcatattcctggcccagctccacttgtccggcctggcatgccatta
ccccgacctcctcaaccacttccgctggttaatgtccctcgctttattgcgccaaatgca
ccacaatattctcatatgcatggagttccacagatgatgcctcccatgcatccacctcca
caacagataccaggccagccgcccatgattaggatgccaggccaaatgggtcatatgcca
accactattcctccgcctcctggtcaggctcagtttatgcctggtccaccacgcccattc
catatgcccccgccgcagcacatgccacccatgatcaatcccattggaatccctcagcct
ccagcaccgcctctgcctccccagcctcctgccgaggagcagccacctccacctgatgaa
ccagatcctaagaggcagagaacagacgacgcttctcttatcccggcagagcagttcctt
gcccagcatctgggccctgctcgcatctcggtatctgtacccaaccttgatgaaggaaac
ttgcggggacaagtcttggaaatttctgtccaatcactctcagatacagtaggtagtctg
aaggagcaaattgctggagaattgcagctccctgctaataagcagaagttgagtgtgagg
actagtttcctcaaagacaaccttactcttgcttactacaatgtgggtcctggagtggtg
atcaatctaactctgagagagcgtggtgggagaaagaaatga

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