Phragmites australis (common reed): 133899055
Help
Entry
133899055 CDS
T10575
Name
(RefSeq) ABC transporter B family member 1-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
paua Phragmites australis (common reed)
Pathway
paua02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133899055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paua02000
]
133899055
04147 Exosome [BR:
paua04147
]
133899055
04090 CD molecules [BR:
paua04090
]
133899055
Enzymes [BR:
paua01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
133899055
Transporters [BR:
paua02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
133899055
Exosome [BR:
paua04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133899055
CD molecules [BR:
paua04090
]
Proteins
133899055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
AAA_29
Zeta_toxin
RsgA_GTPase
nSTAND1
AAA_25
AAA_30
DUF87
AAA_5
AAA_15
APS_kinase
DUF6264
DUF815
Rad17
Motif
Other DBs
NCBI-GeneID:
133899055
NCBI-ProteinID:
XP_062195951
LinkDB
All DBs
Position
18:28492510..28498029
Genome browser
AA seq
1362 aa
AA seq
DB search
MSSDPEEIRPRVVVLGAHADAADEWARPELEAFHLPTPAHHLPGFLQDQPPPAHPKPEAA
SNTCSPSAPPPSPPPPAPLETEQPPNAKPSSSSSSNNDKKPSPSAPAAALRDLFRFADGL
DSVLMAVGTLGALVHGCSLPVFLRFFADLVDSFGSHANDPDTMVRLVVKYAFYFLVVGAA
IWASSWAEISCWMWTGERQSTRMRIRYLEAALRQDVSFFDTDVRTSDVIYAINADAVIVQ
DAISEKLGNLIHYMATFVAGFVVGFTAAWQLALITLAVVPLIAIIGGLSAAALAKLSSRS
QDALSNASNIAEQALAQIRIVQAFVGEERAMRAYSTALAMAQRIGYRSGFAKGLGLGGTY
FTVFCCYALLLWYGGHLVRRHHTNGGLAIATMFSVMIGGLALGQSAPSMAAFAKARVAAA
KIFRVIDHKPGIDRDGVELESVTGRVEMRNVDFSYPSRPDIPILRGFSLSVPAGKTIALV
GSSGSGKSTVVSLIERFYDPNAGQILLDGHDLKTLKLRWVRQQIGLVSQEPTLFATSIKE
NLLLGRESQSATQAEMEEAARVANAHSFIIKLPDGYDTQVGERGLQLSGGQKQRIAIARA
MLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQGG
AVSEMGTHDDLMAKGENGTYAKLIRMQEQAHEAALVSARRSSARPSSARNSVSSPIMTRN
SSYGRSPYSRRLSDFSTSDFSLSIHDPSHHHHRMAEKLAFRAGASSFWRLAKMNSPEWGY
ALVGSLGSMVCGSFSAIFAYILSAVLSVYYAPDPGYMKREIAKYCYLLIGMSSAALLFNT
VQHVFWDTVGENLTKRVREKMFSAVLRNEIAWFDAEENASARVAARLALDAQNVRSAIGD
RISVIVQNSALLLVACTAGFVLQWRLALVLLAVFPLVVSATVLQKMFMKGFSGDLEGAHA
RATQIAGEAVANVRTVAAFNAEGKITGLFEANLRGPLRRCFWKGQIAGSGYGVAQFLLYA
SYALGLWYAAWLVKHGISDFSRTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMHSVFET
IDRKTEVEPDDVDAAPVPERPRGEVELKHVDFSYPSRPDIQVFQDISLRARAGRTLALVG
PSGCGKSSVLALIQRFYEPTSGRVLLDGKDVRKYNLRALRRVIAMVPQEPFLFAASIHDN
IAYGREGATESEVVEAATQANAHKFISALPEGYKTQVGERGVQLSGGQRQRIAIARALVK
QAAIMLLDEATSALDAESERCVQEALERAGSGRTTIVVAHRLATVRNAHTIAVIDDGKVV
EQGSHSHLLNHHPDGCYARMLQLQRLTNGATPGPSSSSNGIA
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcgaccccgaggagatcaggccccgcgtcgtcgtcctcggcgcccacgccgac
gccgccgacgagtgggcccgtcccgagctcgaggctttccacctccctacccccgcccat
catctccccggcttcctacaggaccaaccgccacctgctcaccccaaaccagaagccgcc
agtaacacatgcagcccttctgctcctcctccgtcgccgccgcctccagcgccactggag
accgagcagccgcccaatgccaagccttcatcttcttcctcctccaacaatgacaagaag
ccgtccccgtctgcgccggcggctgccctgcgcgacctcttccgcttcgccgatggcctc
gactccgtcctcatggccgtcggcaccctcggcgctcttgtccacggctgctccctccct
gtcttccttcgcttcttcgcagacctcgttgactccttcggctcccatgccaacgacccg
gatactatggtccgcctcgtcgtcaagtacgccttctacttcctcgtcgtcggagcagcc
atctgggcatcctcatgggcagagatctcgtgctggatgtggaccggcgagcggcagtcg
acgcggatgcggatccggtacctggaggcggctctgcggcaggacgtctccttcttcgac
actgatgtccgcacctccgacgtcatctacgccatcaacgccgacgctgtcatcgtgcag
gacgccatcagcgagaagctcggcaacctgatccactacatggccaccttcgttgccggc
ttcgtcgtcgggttcaccgccgcctggcagctcgccctcatcacgcttgccgtcgtgccg
ctcatcgccatcatcgggggtctcagcgccgctgcgctcgccaagctctcctccagaagc
caggacgcgctctccaacgccagcaacatcgccgagcaggcgctcgcgcagatacggatc
gtgcaggccttcgtcggcgaggagcgcgcaatgcgggcctactcgacggcgctcgccatg
gcgcagaggatcggctaccgcagcggcttcgccaagggcctcggcctcggcggcacctac
ttcactgtcttctgctgctacgcgctgttgctctggtacggcggccacctcgtgcgacgc
caccacaccaacggaggcctcgccatcgccacaatgttctccgtcatgatcggcggcctg
gccctggggcagtcggcgccgagcatggcggcgttcgcgaaggcgcgcgtggcggcggcg
aagatattccgggtcatcgaccacaagccgggcatcgatcgggacggcgtggagctggag
tcggtgacggggcgggtggaaatgaggaacgttgacttctcgtacccgtcgcgaccggac
atccccatcctgcgcggcttctcgctgagcgtgcctgctgggaagaccatcgcgctggtc
ggcagctccggctccgggaagagcaccgtcgtctccctcatcgagaggttctacgacccg
aatgcagggcaaatcttgcttgatggtcacgacctgaagacgctgaagctgcggtgggtg
cggcagcagattgggctggtgagccaggagccgacgctgttcgcgacgagcatcaaggag
aacctgctgctggggcgggagagccagagcgcgacgcaggcggagatggaggaggcagcc
agggtcgccaacgcccactccttcatcatcaagctgcccgatggctacgacacgcaggtg
ggggagcgcggcctgcagctctccggcggccagaagcagcgcatcgccatcgcccgcgcc
atgctcaagaacccggccatcctcctgctggacgaggccaccagcgcgctcgactccgag
tccgagaagctcgtgcaggaggcgctcgaccgcttcatgatcggccgcaccaccctcgtc
atcgcccacaggctctccacaatccgcaaggccgacctcgtcgccgtcctccagggcggc
gccgtctccgagatgggcacgcacgacgacctaatggccaagggagagaatggcacctac
gccaagctcatccgcatgcaggagcaggcgcacgaggccgccctcgtcagcgccaggagg
agcagcgccaggccctccagcgcccgcaactccgtcagctcgcccatcatgacgcgcaac
tcctcctacggccgctcgccctactcccgccgcctctccgacttctccacctccgacttc
agcctctccatccacgaccccagccaccaccaccaccggatggcggagaagctggcgttc
cgcgcgggggccagctccttctggcgcctggccaagatgaactcgcccgagtggggctac
gcgctcgtcggctccctcggctccatggtgtgcggctccttcagcgccatcttcgcctac
atcctcagcgccgtgctcagcgtctactacgcgccggacccggggtacatgaagcgcgag
atcgccaagtactgttacctgctcatcggcatgtcgtcggcggcgctgctgttcaatacg
gtgcagcacgtgttctgggacaccgtgggcgagaacctcaccaagcgtgtgcgcgagaag
atgttctccgccgtgctccgtaacgagatcgcctggttcgacgccgaggagaacgccagc
gcgcgcgtcgccgccaggctcgcgctcgacgcccagaacgtgcgctccgccatcggggac
cgcatctccgtcatcgtccagaactcggcgctcctgctcgtcgcctgcaccgcgggcttc
gtccttcagtggcgcctcgcgctcgtgctcctcgccgtcttcccgctcgtcgtcagcgcc
accgtcctgcagaagatgttcatgaagggcttctccggggacctggagggcgcgcacgcc
agggccacgcagatcgccggcgaggccgtggccaacgtgcgcacagtggcagctttcaac
gcggagggcaagatcaccgggctcttcgaggccaacctgcgaggccctcttcggcggtgc
ttctggaagggccagatcgccgggagcggctacggcgtggcgcagttcctgctgtacgcg
tcgtacgcgctgggcctgtggtacgccgcgtggctcgtcaagcacggcatttccgacttc
tccaggaccatccgcgtgttcatggtgctcatggtctccgccaacggtgccgccgagacg
ttgacgctggcgcccgacttcatcaagggcggccgcgccatgcactcggtgttcgagacc
atcgaccgcaagacggaggtggagccggacgacgtggatgccgcgcccgtgcccgagcgc
cccaggggggaggtggagctcaagcacgtggacttctcgtacccgtcccggccggacatc
caggtgttccaggatatcagcctccgcgcgcgtgccggcagaacgctggcgctggtcgga
ccgagcgggtgcggcaagagctccgtgctcgcgctcatccagcgcttctacgagcccacc
tccgggcgcgtgctcctggacggcaaggatgtcaggaagtacaacctccgggcgctgcgg
cgtgtgatcgccatggtgccccaggagccgttcctgttcgcggccagcatccacgacaac
atcgcgtacggtcgggagggagcgacggagtcggaggtggtggaggcggcgacgcaggcg
aacgcgcacaagttcatctcggcgctgccggagggttacaagacgcaggtgggcgagcgc
ggggtgcagctgtcgggcgggcagcggcagcggatcgccatcgcgcgtgcactggtgaag
caggcggccatcatgctgctggacgaggcgaccagcgcgctggacgcggagtcggagcgg
tgcgtgcaggaggcgctggagcgcgcggggtccgggcgcacgaccattgtggttgcccac
cggctggccacggtgcgcaacgcccacacgatcgccgtgatcgacgacggcaaggtggtg
gagcaggggtcgcactcgcacctgctcaaccaccaccccgacggatgctacgcacgcatg
ctgcagctgcagcggctgaccaatggcgccacgccgggaccgtcgtcgtcgtccaacggg
atcgcgtag
DBGET
integrated database retrieval system
