Phragmites australis (common reed): 133899058
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Entry
133899058 CDS
T10575
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
paua Phragmites australis (common reed)
Pathway
paua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133899058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133899058
Spliceosome [BR:
paua03041
]
Common components
Common spliceosomal components
SR proteins
133899058
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
133899058
NCBI-ProteinID:
XP_062195956
LinkDB
All DBs
Position
18:complement(24169912..24172760)
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AA seq
273 aa
AA seq
DB search
MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA
FVRYKYADEAQKAVDRLDGRSVDGRNIMVQFAKYGPNAEPIRKGRVKEVVEKSRDKSRSC
SPRARHRDRDCRRRSRSRSRERHGRDRERDYRHHSRSRSRSPSSSPDYRSRRRARDDDKR
RSKSRSRSRNKSRSRSRSRSKSRSRSRSRSRSYHSASPARQSTSPRKSPARQRRPTDKSP
EKQTNGKASPPSCSASPSPKRAGSLSPGSDSKE
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttcgggaggtcggggccgccggacatccgcgacaccttctcgctactcgtc
ctcaacatcagcttccgcaccacggccgacgacctcttcccgctcttcgagcgctacggc
aaggttgtcgatgtcttcatcccgagggatcgaaggaccggggactcgaggggtttcgcg
ttcgtgcggtacaagtacgctgacgaggcgcagaaggctgtagatcggcttgatggacga
agtgtggatgggaggaacatcatggtgcagtttgccaagtatggccccaatgcggagcca
atccgtaaaggaagggtaaaagaggtggttgagaaatcacgagataagtcaagaagctgt
agtccaagggcaaggcacagagacagggattgtaggaggcgaagtcgcagcaggagcaga
gaaaggcatggccgtgatagggagagggactatcgtcatcatagcagaagcagaagcaga
agtccaagttcaagccctgactacagaagtcgtcgtagggcaagagatgatgacaagcgc
aggagcaagagtaggagcagaagcaggaacaagagcaggagtaggagcagaagcaggagc
aagagcaggagcagaagcaggagtagaagccgctcataccatagtgcttcacctgctcgg
caaagtactagtccacgcaagagcccagcacgacaaaggaggcccactgacaaaagtcct
gaaaagcagaccaatggaaaagcgtcacctccatcatgcagtgcttctccatcaccaaag
cgtgcaggctcacttagtcctggcagcgatagcaaggaataa
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