KEGG   Phragmites australis (common reed): 133899146
Entry
133899146         CDS       T10575                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
paua  Phragmites australis (common reed)
Pathway
paua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133899146
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paua03019]
    133899146
   03041 Spliceosome [BR:paua03041]
    133899146
Messenger RNA biogenesis [BR:paua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     133899146
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     133899146
Spliceosome [BR:paua03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    133899146
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 RRM_Nup35 Nup35_RRM_2 Neprosin
Other DBs
NCBI-GeneID: 133899146
NCBI-ProteinID: XP_062196085
LinkDB
Position
18:complement(24534119..24537485)
AA seq 359 aa
MGKAEPRPKGHAGGGGSGSLGKIFVGGLPRDTTDAMFVRHFGQYGEIVDSVIMKDRYISQ
PRGFGFITYSNPAVVDKVIEDIHVINGKQVEIKRTIPKGSVQSSSKDFKTKKIFVGGLPS
SLTEDDFKNFFVKYGSVVDHQIMRDHETKRSRGFGFIVFASEQVVNDLLANGNMIDLADS
KVEIKKAEPKKSSNPPPLVHGRNSRSAYDSDSRDHPSADNYGGLASVYVNYRGGGFDPYR
RDEDFGGRLGSYGGLGEFGGGYGRYYPGIGGYGDASSFGYPNRLGLYGGFHGAYAGGDLS
GYRPGGADESFGGLGSSAFGGSVYGGAYDSALGSFGSGSTPDRNRGSFTGRSGRYQPYG
NT seq 1080 nt   +upstreamnt  +downstreamnt
atggggaaggcggagccaagacccaaggggcacgcgggcggcggcggaagcggcagcctg
gggaagattttcgtcggggggctcccgcgggacaccacagacgctatgtttgtgaggcat
tttggccagtatggagaaatagttgattcagtaataatgaaagataggtacatatctcag
ccacggggttttggcttcattacatactctaaccctgctgttgttgataaagtgatagag
gacattcatgtcatcaatgggaagcaagttgagattaagagaaccataccgaaaggatcg
gtgcaatctagctctaaggatttcaagactaaaaagatatttgttggtgggcttccctca
tcactaacagaagatgatttcaagaatttctttgtaaaatatgggtctgtggtagaccac
cagattatgcgtgatcatgaaacaaaacgctctcgaggctttggatttatagtttttgct
tctgagcaagttgtaaatgatttgttagcaaatggaaatatgattgatcttgctgattca
aaggtggagatcaagaaagcagaaccaaagaaatcctcaaatccaccaccattagtgcat
ggtagaaattctaggtcagcatatgatagtgactctagggatcatccttctgctgataac
tatggtggattggcgagtgtttatgtcaattacaggggtggtggatttgatccttatagg
agagatgaagatttcggcggtaggcttggcagctatggtgggttaggtgaatttggcggt
ggatatggtcggtactatcctggaatagggggttatggagacgcgtcatcatttggttac
cctaatcgcttagggttatatggaggttttcatggagcttatgctggtggggacttaagt
ggctatagacccggtggtgctgatgagagctttggtggccttggtagttctgcctttggt
ggttccgtctacggtggggcatatgattccgctctaggtagttttggatctggtagcaca
cctgacaggaatagggggagttttactggtaggtcaggccgatatcagccttatggatga

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