Phragmites australis (common reed): 133899216
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Entry
133899216 CDS
T10575
Name
(RefSeq) LOW QUALITY PROTEIN: isoamylase SU1, chloroplastic-like
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00500
Starch and sucrose metabolism
paua01100
Metabolic pathways
paua01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
133899216
Enzymes [BR:
paua01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
133899216
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GFIT
Motif
Pfam:
ISOA1-3_C
Alpha-amylase
CBM_48
GHL10
Motif
Other DBs
NCBI-GeneID:
133899216
NCBI-ProteinID:
XP_062196173
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Position
18:26101057..26108804
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AA seq
784 aa
AA seq
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MAQLPCLYAARPLLAVAAGRRPCRWHGPRGGVRRRPNAGSGVVGVRAAAVEAVVEEEGDA
EEKVERYALGGTCKVLAGMPAPLGATALAGGVNFAVYSGGASAAALCLFTPDDIKANRVT
EEVPLDPLLNRTGNVWHVFIQGEQLHTMLYGYRFDGVFAPERGLYYDVSNVVVDPYAKAV
ISRGEYGVPAPGGDCWPQMAGMVPLPYTTFDWQGDLPLRYHQKDLVIYEMHLRGFTKHDS
SNIEHPGTYIGAVSKLNYLKDLGVNCVELIPCHEFNELEYFSSPSKMNFWGYSTINFFSP
LTRYSSGGVSNYGHDAINEFKTFVREAHKRGIEVIMDVVFNHTAEGNEKGPILSFRGIDN
STYYMLAPKGEFYNYSGCGNTFNCNHPVVREFIVDCLRYWVTEMHVDGFRFDLASIMTRG
CGLWDPVNVYGSPIEGDMITTGTPLVAPPLVDMISNDPILGGVKLIAEAWDAGGLYQVGH
FPHWNIWSEWNGKYRDTVRQFIKGTDGFAGAFAECLCGSPQLYQAGGRKPWHSVNFVCAH
DGFTLADLVTYNNKYNLSNGEDNRDGENHNFSWNCGEEGEFASLSVRRLRKRQMRNFFVC
LMVSQGVPMFYMGDEYGHTKEGNNNTYCHDHYVNYFRWDKKEEQSSDLYRFCRLMTKFRR
ECESLGLEDFPTAERLQWHGHQPGKPDWSEASRFVACSMKDETKCEIYVAFNTSHLPVVV
GLPERPGYRWELVVDTGKQAPYDFLTDDLPDHALTIHQFSHFLNSNLYPMLSYSSIILVL
RPDV
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagctcccctgcctctacgccgcgcgcccgttgctcgccgtggccgctgggcgc
cggccgtgtcggtggcacggcccgcgcggcggcgtacggcggcggcccaacgcgggaagc
ggggtcgtgggggtccgcgccgcggcggtggaggcggtggtcgaagaggagggggacgcg
gaggagaaggtggagaggtacgcgctgggcggcacgtgcaaggtgctcgcgggaatgccc
gcgccgctgggcgccaccgcgctcgccggcggggtcaacttcgccgtctactccggcggg
gcttccgccgcggcgttgtgcctgttcacgcccgacgatatcaaggcgaatagggtcact
gaggaggttccccttgatcccctgctcaaccggacggggaatgtgtggcatgtgtttatc
caaggggagcagctgcacaccatgctctatggctacaggtttgatggcgtgttcgcccct
gagcgcggtctgtactacgatgtgtccaatgttgtggtggatccttatgctaaggcagtt
ataagccgaggtgagtacggtgttccggcacctggaggcgattgctggcctcaaatggct
ggcatggtccctcttccatatactacgtttgattggcaaggtgatctacccctaagatat
catcagaaggaccttgtaatatatgaaatgcacttgcgtggattcacaaagcatgattca
agcaacatagaacatccaggaacttacattggtgctgtatcaaagcttaactatctgaag
gaccttggagtgaattgtgtagagttaattccctgccatgagttcaacgagctggagtac
ttcagttccccttccaagatgaacttctggggatattctacgataaactttttctcacca
ttgacaaggtattcgtcaggtggcgtaagcaactatgggcatgatgccataaatgaattt
aaaacttttgtaagagaggctcataaacggggaattgaggtgatcatggatgttgtcttc
aatcatacagctgagggtaacgagaagggtccgatattatcatttaggggtatagataat
agtacgtactacatgcttgcacctaagggagagttttataattattctggttgtggaaat
accttcaattgtaatcatccggtagtccgtgaatttattgtagattgcttgagatactgg
gtaacagaaatgcatgttgatggttttcgttttgaccttgcatctataatgaccagagga
tgcggtctatgggatccagttaatgtgtatggaagtccaatagaaggtgacatgattaca
acagggactcctcttgttgccccaccactagttgacatgattagcaacgacccgattctt
ggaggtgtcaagctcattgctgaagcatgggatgcaggaggcctctatcaagtaggccat
tttcctcactggaacatttggtcagagtggaacgggaagtatcgtgatactgtgcgtcag
ttcatcaaaggcacagatggatttgctggtgcttttgctgaatgtctatgtggaagtcca
cagttataccaggcaggggggaggaagccttggcacagtgttaactttgtatgtgcacat
gatggatttacactggctgatttggtgacatacaataacaagtacaacttgtctaatggt
gaggacaacagagatggggaaaatcataattttagctggaattgtggggaggaaggagaa
ttcgcaagcctgtcagtcagaagattgaggaagaggcaaatgcgcaatttctttgtttgt
cttatggtttctcaaggagttccaatgttctacatgggcgatgaatatggccatacaaag
gaagggaacaacaatacatactgccatgaccactatgtcaattatttccgttgggataaa
aaggaagaacaatcctccgacttgtacagattttgccgcctcatgaccaaattccgaaga
gaatgtgagtctcttggccttgaggacttcccaacagcagaacggttgcaatggcacggt
catcagcctgggaagcctgactggtcggaggcaagccgattcgttgcctgctccatgaag
gatgaaacaaaatgcgagatctatgtggccttcaacaccagtcacctgccagtggttgtt
ggacttccagagcgcccagggtaccgatgggagctggtggtggacacaggcaagcaagca
ccatatgacttcctcaccgatgacctaccagatcacgctctaaccatccaccagttctct
catttcctcaactccaacctctaccctatgctcagctactcttccatcatccttgtactg
cgccctgatgtttga
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