Phragmites australis (common reed): 133899223
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Entry
133899223 CDS
T10575
Name
(RefSeq) homeobox-leucine zipper protein ROC1-like
KO
K09338
homeobox-leucine zipper protein
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133899223
Transcription factors [BR:
paua03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
133899223
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
MRP-L20
DivIC
TUSC1
HTH_Tnp_1
DciA_cyano_C
Motif
Other DBs
NCBI-GeneID:
133899223
NCBI-ProteinID:
XP_062196181
LinkDB
All DBs
Position
18:4580386..4585605
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AA seq
780 aa
AA seq
DB search
MTSARRMPAMIGRNGVAYGSSSALSLNQADLLDSHHLQQAFQQQLFDQIPAAAVDSSDNM
IHGRADALADEFESKSCSENPDGASGDDDGQEDPNQRPNKKKRYHRHTQHQIQEMEAFFK
ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERQENAQLRAENDKLRAENMR
YKEALGTASCPSCGGPAALGEMSFDEHHLRLENARLRDEIDRISGIAAKHVGKPMVSFPV
LSSPLAAAAARSPLDLAGAYGVQPTGLVADHLFGVGAGAGELLRSVSTGQLDADKPMIVE
LAVAAMDELLRMARLDAPLWGAGAAGAQLDEEEYGRMFPGGLGPRQYGLRPEASRDGAVV
IMTRDSLVEILMDANRFTAVFSSIVSSASTHEVLSTGVAGSYNGALQVMSMEFQVPSPLV
PTRESYFLRYCKHNPDGTWAVVDVSLDSLRPSPVLKCRRRPSGCLIQEMPNGYSKVTWVE
HVEVDDRSVHNLYKPLVNSGLAFGAKRWVGTLDRQCERLASAMANNIPNGDLGVITSIEG
RKSMLKLAERMVASFCGGVTASAAHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNAA
TSFWIPVPPKRVFDFLRDETSRSAWDILSNGGAVQEMAHIANGRDHGNCVSLLRVNSTNS
NQSNMLILQESCTDASGSYVVYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGPPGAA
ATQGESVGGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAICGEANPQ
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcggcgaggcgcatgccggcgatgatcggccggaatggcgtcgcatatgggtcg
tcgtcagcgctgtctctgaaccaggctgacttgctagacagccatcacctgcagcaagcg
ttccagcagcagctcttcgaccagatcccggccgccgcagtggacagcagcgacaacatg
atccacggccgcgccgacgcgctagctgacgagtttgagagcaagtcgtgcagcgagaac
cccgacggcgcctctggcgacgacgacgggcaggaggaccccaaccagcggccaaacaag
aagaagagataccaccgccacacccagcaccagatccaggagatggaagcgttcttcaag
gagtgcccgcacccggacgacaagcagcggaaggagctgagccgggagctcggcctcgag
ccgctgcaggtcaagttttggttccagaacaagcgcacacagatgaagaaccagcacgag
cggcaggagaacgcgcagctgcgcgcggagaacgacaagctgcgcgccgagaacatgcgg
tacaaggaggcgctcggcacggcgtcctgccccagctgcggcggcccggccgccctcggc
gagatgtccttcgacgagcaccacctccgcctcgagaacgcccgcctccgcgacgagatc
gacaggatctcgggcatcgccgccaagcacgttggcaagcccatggtctccttcccggtg
ctgtccagcccgctggccgccgctgccgcccgctccccgctagacctcgccggcgcgtac
ggcgtacagccgactggcctcgtcgccgaccacctgttcggcgttggagccggcgccggg
gagcttctgaggagcgtgtcaacgggccagctcgacgccgacaagcccatgatcgtcgag
ctggccgtcgccgccatggacgagctcctccggatggcgcggctcgacgcgccgctctgg
ggcgcgggcgcggcgggggcgcagctggacgaggaggagtacggccggatgttccctggc
gggctcgggccgaggcagtacgggctccggccggaggcgtcccgtgacggcgccgtcgtg
atcatgacgcgcgacagcctcgtcgagatcctcatggacgcgaaccgattcactgcggtg
ttctccagcatcgtgtccagtgcttctacgcatgaggtgctgtccaccggcgtggcaggg
agctacaatggtgcattgcaagtgatgtcaatggagttccaggtgccgtcgccgctggtg
ccgacacgggagagctatttcttgaggtactgcaagcacaaccctgatggaacatgggct
gtcgtcgatgtctctctcgacagcctccgccctagccctgttttgaagtgccggcgcagg
ccgtccggctgccttatccaagaaatgcccaatggctactcaaaggtgacctgggtggag
catgttgaggttgatgacaggtcggtgcacaacctctacaagcctttggtgaattcaggc
ctcgcattcggcgcgaaacgatgggtcggcacgctggaccggcagtgcgagcgcctcgcc
agcgccatggccaacaacatccccaacggcgaccttggtgtgatcacaagcatagaaggg
aggaagagcatgctgaagctggcggagcgtatggtggcgagcttctgcggcggcgtgacg
gcgtctgctgcacaccagtggacgacgctgtcgggcagcggcgcggaggacgtgcgcgtc
atgacgaggaagagcgtcgacgaccccggcaggccaccgggcatcgtgctcaacgccgcc
acctcattctggatccccgtcccgcccaagagggtcttcgacttcctccgcgacgagacc
tctcgcagcgcgtgggacatcctctccaacggtggtgccgtccaagaaatggctcacatc
gccaacggccgggaccatggcaactgcgtctcacttcttcgtgtcaatagtacaaactcg
aaccagagcaacatgctgatcctgcaagagagctgcaccgacgcgtcgggctcgtacgtc
gtgtacgcgccggtggacgtggtggcgatgaacgtggtgctcaacggcggcgacccagac
tacgtggccctgctgccatcgggcttcgccatcctccctgacgggcctccgggtgccgcc
gccacgcaaggggagagcgtcggtggtggcgggtccctcctgacggtggcgttccagatc
ctggtcgactccgtccccaccgcgaagctctcgctgggctccgtcgcgacggtgaacagc
ctcatcgcctgcaccgtggagcgcatcaaggccgccatctgcggggaagccaacccgcag
tag
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