Phragmites australis (common reed): 133899306
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Entry
133899306 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133899306
KO
K15198
transcription factor TFIIIB component B''
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133899306
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
133899306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Myb_DNA-bind_6
SANT_DAMP1_like
Spa1_C
Motif
Other DBs
NCBI-GeneID:
133899306
NCBI-ProteinID:
XP_062196275
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All DBs
Position
18:23524675..23536472
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AA seq
839 aa
AA seq
DB search
MIDDEADFNNIFDAPAEVKTAAKFRPKQGVKPRKATLPSKSAAFNPTANIKDGKVGALTQ
GNSSEEITSQGRASLTGPDSETVDDVTGSRSILEVMSKDVLTVPLVPRNDRGVPRDSPTG
GASAGDRVSQDDEHDDDSSKLATHQENLLVSDIHVSSASSYSKIIDDIVEFGEMFDEQAE
EERVAKFQPRVQLKIKAASKSRKANQKVEASTVDAVTLNERGDNNQTGLHDDQLQAPRCH
KSVQTSDSEALLATENSTVGNLANLDSVLEEPVQEETVGKFRPKLCLKPGKASSKVAGSN
DNVAAATPMVGVCAVDVILQDKKDQKTITGPAPWSPQDVHANVDLDSQNELINPHTYGTQ
SMSREVSAEHTVKSQPNAGEKKGKGKSVSFVPLDASEGVSPTNIYSEMGYFDHSCNDTLT
DENLNNAPQQTAEKHCIAKEQYSNGQVYTDKESQSHEREPSDHAVEQQPKMNAGESGSSM
KLRRREKLQKVGIPEHTADDCFDEDYVGPSAAEQDNDSGDDYTAGGKRKVRRKSRDGISK
EPPRDSMFLEEPQQHKVQKDKSQVSSRGRKRTSKDAATEKPDKKLTHRIRQKKMKEVKTL
LETSDKIDHMKLSATHLRLLQEIRERVKGKEIPSGPSSNTSFQLEDPDGFDSFGDNEAHN
FDDNRTENSVLQNATKLNYHSYMNKQTRAKWSKSDTDLFYQGLRQFGSDFAMIQQLFPDK
TCHQVRQKFKTEERKNPMQVHDAIIHRSGDNLYFKKVIKQLNIEDVLPEMNSTHKQEQEG
VSNEGGRGNENALDDFIDEEGENGSNWSDKELGTHRSYVQEEHVPGNADVDLGDVFDWY
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgattgatgatgaggctgacttcaacaacatctttgatgccccagcagaagtgaagacc
gctgcaaagttccgtcccaagcaaggggtcaagccccgaaaggcaactctgccatccaaa
tctgcagcgtttaatcctactgcgaacattaaagatggaaaagtaggagccttaactcaa
ggcaattcttctgaagaaatcactagtcaaggaagagcatccttgacaggcccagatagt
gagacagtcgatgatgtaaccggttctcggagtattcttgaagtaatgtcgaaagatgtg
cttacagttcccctggtgcctcgaaacgatcgtggtgtgccacgggattctccaacaggt
ggtgcttctgctggagatagggtttctcaagacgacgagcatgatgatgattcatctaaa
ttagctacacaccaagaaaacttgttggtttcagatatccatgtatcatctgccagttca
tatagcaagattattgatgatatagttgaatttggggaaatgtttgatgaacaagctgaa
gaggaaagagttgcaaagttccagcctagggtacagttgaagattaaggcagcatccaaa
tcacggaaggctaaccaaaaggtggaagcttccactgtagatgcggtcacactaaatgaa
agaggtgataataatcagacaggactccatgatgatcagctacaggctcctagatgtcat
aaaagtgtgcagacctcagattctgaagcattattggcaactgaaaatagtacagttggc
aatttagctaacctcgacagtgtccttgaagagccagttcaagaggaaacagttgggaag
tttcggcctaaattgtgtctgaagcctgggaaggcttcatccaaagttgctgggagtaat
gacaatgttgctgcagctacaccgatggttggagtttgtgctgtagatgtgatccttcaa
gataaaaaagatcaaaaaaccatcacaggtccagccccttggtcacctcaggatgtgcat
gctaatgtcgatttggactctcagaatgagcttataaatcctcatacttatggcactcaa
tcaatgtctagagaagtttctgctgaacacactgttaaatctcaacctaatgctggagaa
aaaaagggcaaaggaaaatcagtatcttttgttccacttgatgcttctgagggggtttca
cctacaaatatttactctgagatgggttacttcgaccattcctgtaatgacacattgact
gatgaaaatttaaataatgcacctcagcaaacagctgaaaagcattgtattgctaaagaa
caatattcaaatggtcaggtatataccgataaagaaagccagagccatgagagggaacca
tcggatcatgctgttgaacaacagccaaaaatgaatgctggagaatcaggatcatccatg
aaactgcggaggagggaaaagttgcagaaagttggtatacctgagcatactgctgatgac
tgttttgatgaagactatgttggaccttcagcagctgaacaagataatgatagtggtgac
gattacactgctggtggcaagcggaaggtaaggcgaaagtcaagggatggtataagtaaa
gaacctccaagggattcaatgttcttagaagagccgcagcagcataaggttcaaaaagat
aaaagccaagtatcttcacggggccgcaagagaacctcgaaagatgcagcgacagaaaaa
cctgataaaaagcttacccacagaattcgtcagaagaaaatgaaagaggttaagacttta
ctggaaacatctgataagatagatcacatgaagctaagtgcgacacatctcaggttgtta
caagaaataagagagcgtgttaagggtaaagaaattccatccggaccatcctctaataca
agcttccaacttgaagatccggatggttttgattcatttggagataatgaagcacataac
ttcgacgacaacagaacagagaacagtgtactacaaaatgcaaccaaactgaattatcat
tcctacatgaacaaacaaacacgagccaaatggtcaaaatctgatactgacttgttttac
cagggacttcgacaatttggtagcgattttgcaatgatacaacaattattccctgataag
acctgtcatcaggtgcggcaaaagtttaaaactgaggagagaaaaaatccgatgcaagtt
catgatgctataattcatcgctcgggggataatttgtatttcaaaaaagtaattaaacag
ctcaacattgaagatgtgctaccagagatgaacagtacacataaacaagaacaagagggt
gtgtcaaatgagggcggccgtggaaatgagaatgcattggatgatttcatcgacgaggaa
ggagaaaatggttcaaattggtcggataaagagcttggcacgcacaggtcttacgtccaa
gaagagcatgttcctggaaatgctgatgttgatcttggggatgtcttcgattggtactag
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