Phragmites australis (common reed): 133899449
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Entry
133899449 CDS
T10575
Name
(RefSeq) protein argonaute 4A-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133899449
03036 Chromosome and associated proteins [BR:
paua03036
]
133899449
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133899449
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133899449
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133899449
microRNA pathway
RISC loading complex
133899449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Reo_sigmaC
Motif
Other DBs
NCBI-GeneID:
133899449
NCBI-ProteinID:
XP_062196424
LinkDB
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Position
2:complement(11079257..11089803)
Genome browser
AA seq
904 aa
AA seq
DB search
MESHNGEADDLPPPPPLPPNVKATKAEEPKKLSKPTKVLVPRKGFGKKGQQIRLLTNHFK
VSLKTTDEFFYHYYVNLKYEDDRPVDGKGVGRKVIDKIQQTYGTELANKDFAYDGEKSLF
TIGALPQVNNEFTVVLEDVSTGKTAANGSPGNDSPSGSDRKRVRRPYQTKTFKVELSFAA
KIPMSAIAQALRGQESEHTQEAIRVIDIILRQHSAKQGCLLVRQSFFHNNPSNFVDLGGG
VMGCRGFHSSFRVTQSGLSLNIDVSTTMIVKPGPVVDFLLANQKVDHPNKIDWAKAKRAL
KNLRIKTSPANTEYKIVGLSDRNCFEQMFTLKNRNCGNGDSEATEISVYDYFVKNRGIEL
RYSGELPCINVGKPKRPTYFPIELCSLVPLQRYTKVLSTLQRSSLVEKSRQKPQERMSVL
SDVLQRSNYDSEPMLMACGISIAKSFTEVDGRVLQAPKLKAGNGEDIFTRNGRWNFNNKR
LIKASSVEKWAVVNFSARCNVRDLVRDLIKCGGMKGIKVDQPFDAFEENPSMRRLPPVRR
VDDMFEQVKTKLPGAPKFLLCVLAERKNSDVYGPWKKKCLAEFGIVTQCVAPTRVNDQYL
TNVLLKINAKLGGLNSLLQIEATPAIPLVSKVPTVILGMDVSHGSPGQSDVPSIAAVVSS
REWPLISKYRASVRSQSPKLEMIDSLFKPNGTEDDGLIRELLIDFYTSSGKRKPDQIIIF
RDGVSESQFTQVLNIELDQVIEACKFLDENWNPKFTLIVAQKNHHTKFFLPGSPDNVPPG
TVVDNKVCHPRNYDFYMCSHAGMIGTTRPTHYHILHDEIGFTPDDLQELVHSLSYVYQRS
TTAISVVAPVCYAHLAASQVGQFIKFDEMSETSSSQGGHTSAGSVPVQELPRLHEKVRSS
MFFC
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccacaatggcgaggctgatgacctgccccctccacctccgcttccacctaat
gtgaaagccactaaagctgaggaaccaaagaagttgtcaaaacctacgaaggtgctggtc
cctaggaaaggttttggcaagaaggggcaacagataaggcttttaacaaaccactttaaa
gtttctctgaagacaacagatgaatttttctatcactactatgtgaatctgaagtatgaa
gatgataggccggttgatggcaagggggtaggacgaaaagtgatcgacaagatccagcaa
acttacggtactgagcttgcgaataaagactttgcatatgatggtgagaagagcctgttt
acaattggtgctcttcctcaagtgaacaacgagttcactgttgtgctggaagatgtttca
actggaaagacggcagcaaatggcagtcctggcaatgatagcccctctggaagtgacagg
aaaagggttagaaggccataccagacaaagacatttaaagtggagctatcctttgcagcg
aaaatccctatgagtgcaattgcacaggctttgagaggtcaggaatcagagcacactcag
gaagcaattcgagttattgatatcatattgaggcagcactctgcaaagcagggttgcctg
ttggtccgccaatctttcttccataacaatccttcaaactttgttgacttgggcggtggt
gtaatgggctgtagaggattccattctagttttcgcgtaacacagagcgggctttcactt
aatattgatgtgtccactacaatgattgtcaaacctggtcctgttgttgattttctgctt
gccaaccagaaggttgatcatccaaataagattgactgggctaaggccaagcgtgcactg
aagaacttaaggattaaaaccagtccagcaaatactgaatataagattgttggtttgagt
gacaggaattgctttgaacaaatgttcacactaaagaatagaaactgtggcaatggtgac
tctgaagcaacagagattagtgtttatgattactttgtgaagaaccgtggcatagagttg
agatactctggtgagcttccgtgtattaatgtggggaaaccgaagcggccaacctatttt
cctattgagttgtgtagccttgtgcctttgcaaagatacactaaggttttgagtacactt
cagaggtcctcgcttgttgaaaagtctaggcagaaaccccaggaaaggatgtcagttttg
tctgatgtactgcaacgcagcaactatgattcagagcctatgctgatggcatgtggcatt
tcaatagctaaaagtttcactgaagttgatggtagggtgctgcaagcccccaagcttaaa
gctggaaatggagaagatatttttacacgtaatgggagatggaacttcaacaataagagg
ctcattaaagccagcagtgtcgagaaatgggctgtggtgaacttttcagcgcgatgcaat
gtcagggatctcgtccgagatctcatcaagtgtgggggcatgaagggaattaaagtagat
caaccctttgatgcatttgaagagaatccttcaatgagacggttacctcctgtaagaagg
gttgatgacatgtttgaacaagtaaaaacaaagcttcctggagcacccaagtttcttctg
tgtgttcttgctgagaggaagaattctgatgtttatgggccttggaagaagaaatgtctt
gctgaatttgggattgttacacagtgtgtagcacctacaagagtcaatgatcagtatctt
acaaatgttctgctaaagataaatgcgaagcttggtgggttaaattcactgcttcaaatt
gaagcaacccctgctattcctcttgtatccaaggtcccaactgtcatactgggaatggat
gtctcccatggttcacctggacagtctgatgttccttccattgctgcggttgttagttct
cgtgaatggccactgatttcaaaatacagagcttcggtgcgttctcaatcacccaagtta
gaaatgattgattccttgtttaagccaaatggaactgaggatgatggcctcattcgggag
ttgctgatagacttctacaccagttctgggaagagaaaacctgatcaaatcattatcttc
agggatggtgttagtgaaagtcagtttactcaggtgctaaacattgagttagatcaagta
attgaggcatgcaagtttctggatgaaaattggaatcctaagttcacattgattgttgcc
cagaaaaatcatcatactaagtttttcttgcctggatctccggataatgttcctcctggt
actgttgtggataacaaagtctgccacccaaggaactatgacttctacatgtgttcgcat
gctggaatgatagggactacgaggccaacacattaccatatcctgcatgatgagataggc
ttcacccctgatgacctgcaggagttggtgcattcactgtcttatgtctatcaaaggagc
actacagccatatccgttgttgctccggtctgctacgcacaccttgccgcatcccaggtt
ggccagttcataaagttcgacgagatgtcagagacctcctccagccagggaggccacacc
tcggcgggcagcgtcccggtgcaggagctgccccgcctgcacgagaaagtcaggagctcc
atgttcttctgctga
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