Phragmites australis (common reed): 133899508
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Entry
133899508 CDS
T10575
Name
(RefSeq) KH domain-containing protein At4g18375-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133899508
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
133899508
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
KH_5
Motif
Other DBs
NCBI-GeneID:
133899508
NCBI-ProteinID:
XP_062196481
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Position
18:5325444..5331690
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AA seq
631 aa
AA seq
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MRQQAGKRTHQHRDYDRDERNYQKKRPFAHAQESSNNDELVVYRILCPDSVIGSVIGKNG
NVINAIRQQTNAKVKVVDPYPGSDKRIILVYCYVKHRDLDANEGDDSEPVCAAQDALLRV
QNAIVDALDTLSKNRRDSDKKNTEEANILVPASQAASIIGKSGVVIKYLRSTSRAFIKVS
PKDPNDVTHSCAMSFDNFVQIMGGAEAVRKALFGISTIIYKYPSKENIPLETSVSELTSS
IIVPSELPVYPASNFYSAPDAASGHPSLSILGSTPHVPELTLPADAHGRLPIYQSVLPIV
PTYSTPKCSGELVFRVLCPGDKIGLVIGRGGGTIKSIRQESGARIDVDDAKNDKEESIIT
ITSTEATDDVKSEAVEAVLLLQSKINDYDEDRMNLRLLVPTKVIGCLIGKGGSIVNDMRK
KTKADIRISKGNKPQRASSSDELVEVFGEVDKLRDALVQIVLRLREDVLKDRVDIQNSDR
DGKLKVATNDSLYGSSLSLPALLPYSQQIAPLGYDQRGETERGLEVFPRSSSYGYSSFQV
ADEGYGGLLSYTSKSYEGRFPHVEMTIPASGLSKVMGKRGTNLDNIIKISGAHIDITESK
SSRHDHVAHISGTSEQRQSAENLIKAFIMST
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaacaggctggtaaacgcacccaccaacacagggactatgacagagacgaaagg
aattaccaaaagaagaggccatttgcccatgcccaggaaagctctaataatgatgaattg
gttgtttaccgtatactctgtccggacagtgtgattggtagtgtaataggaaagaatggc
aatgtaataaatgctattcggcaacagacaaatgccaaagtcaaggttgttgacccttac
cccggttcagacaaaaggattatcttggtatattgctatgtcaaacatagagacctggat
gctaatgagggtgatgacagtgagcctgtttgcgcagctcaagatgcattacttagggtg
cagaatgcaattgttgatgcactagatacgttaagtaagaatcgtagagactctgataag
aagaataccgaagaagcaaacatccttgtaccagctagtcaggctgcaagtattattgga
aaatctggtgttgtcatcaaatatcttcgttcaacttcgagagcattcattaaagtgagc
ccaaaagatccaaatgatgttacacactcatgtgctatgagttttgataattttgttcag
ataatgggtggtgctgaagctgtcagaaaggcactgtttggaatatcaaccatcatctac
aagtacccatctaaagagaacattcctcttgaaacttctgtttctgaacttacttcaagc
attatagttccttcagaacttcctgtctatccagctagtaacttctactcagccccagat
gctgcttctggacatccaagtctatccatcttagggtcaacacctcatgtacctgaactt
actctgcctgctgatgctcatggccgactgcctatttatcaatctgttcttcctattgtt
cctacttatagtaccccaaaatgttcaggagagctagtatttcgtgttttatgccctggt
gacaagattgggttggttattggtagaggtggggggaccataaagagtataaggcaagag
agtggtgcaaggatagatgttgatgatgcaaagaatgacaaggaggaaagtataatcacc
attacatccactgaggctaccgatgatgttaagtctgaagctgtggaagctgttttgctg
cttcagtcaaagatcaatgattatgatgaagatagaatgaatcttcgccttcttgtccca
actaaggttataggctgtcttattggcaagggtggttcaatagtcaatgacatgcggaag
aagactaaggcagacatccgcatatcgaagggcaataagccccagagggcatcttccagt
gatgagcttgttgaggtatttggagaagtggacaagctgcgtgatgctcttgtacaaata
gttttaagacttagagaagatgtcctgaaagacagggtggacatccaaaattctgacagg
gatggcaagctaaaagttgccaccaatgattccttatatggaagcagtctttctttgcct
gcactattaccttacagccaacaaatcgctcccttgggctatgatcaaaggggtgaaact
gagcgaggtctggaagtattccctcgtagcagttcgtatgggtatagctcctttcaggtt
gcagatgagggctatggaggacttctgtcatatacatcaaagtcatatgaaggacgtttt
ccacatgtggaaatgactattcctgctagtggcctgtcaaaagtaatggggaaacgtggc
acaaacttggacaatattataaagatttctggagctcacattgacattactgaatcaaaa
tcatctcgtcatgaccatgttgctcacatatctggcacctctgagcagaggcaatcagct
gagaatttgatcaaagctttcataatgtctacttaa
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