Phragmites australis (common reed): 133899637
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Entry
133899637 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG3-like isoform X1
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133899637
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133899637
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133899637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
Prok-RING_4
zf-C3HC4_2
zf-RING_5
Sina_RING
RING_XB3-XBAT31
zf-RING_2
TerY_C
zf-P11
Motif
Other DBs
NCBI-GeneID:
133899637
NCBI-ProteinID:
XP_062196645
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All DBs
Position
18:complement(24661016..24664679)
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AA seq
441 aa
AA seq
DB search
MELECFDRSARFHNPAAGIQLGFSLPQRFPPPPRVPRNRSIGKEEAMGSFFSKENPSGRR
PYDYNHNHAAPRGGNNRYAKFGDDYHTLEQVTDALAHAGLESSNLIVGIDFTKSNEWTGK
LSFNNRSLHATGDIPNPYEQAISIIGRTLARFDEDNLIPCFGFGDATTHDQKVFSFYPDN
QPCDGFEQALGRYREIVPHLRLAGPTSFAPMIETAIGIVDSSGGQYHVLLIIADGQVTRS
VETGNGQLSPQERETIDAIVKASDYPLSIVLVGVGDGPWDMMRKFDDNIPSRAFDNFQFV
NFTEIMLRPINTSKKEAEFALSALMEIPAQFKAAMNLQLLGRRRGFSHQPVVPPPVSDRR
QYSGCTAVKQTESTSYGSVPKTASAPQHDSDVGDQQTCPICWSQAKNLAFGCGHQTCSEC
GKNLKVCPLCQREISTRIKLY
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggaactcgagtgtttcgatcgctccgctcgttttcacaatcccgccgccggaattcag
ttgggcttctcgctcccgcagcggtttcctcctccgccaagagttccgcgcaatagatcg
attgggaaggaggaggccatgggatcgttcttctccaaggagaatccgtcggggcggcgg
ccgtacgactacaaccacaaccacgccgcgccgagaggtgggaacaatcggtacgccaaa
ttcggcgacgattaccacaccctggagcaggttactgatgctcttgcacatgctggtctg
gagtcctcaaatctgattgttggaattgatttcacgaagtccaatgaatggacaggcaaa
ttgtccttcaacaaccggagcttgcacgcaacgggagacattccaaacccatatgagcaa
gctatatccatcatagggagaaccctcgctcgatttgatgaggacaacctgataccatgc
tttggattcggtgatgcaactactcatgatcagaaggtatttagcttctatcctgataac
caaccgtgtgatggctttgaacaagcacttggtcgatacagagaaattgttccacatctt
cgtttggctggtccaacttcatttgcaccaatgattgagactgctattggaattgtggat
agtagtggtggccagtaccatgtcctgcttataatagcagatggacaggtcacacgcagt
gttgaaacgggcaatggacagttgagcccacaggaaagggagactatcgatgccattgtg
aaggctagtgactacccgctatcgattgtgcttgttggagttggtgatggaccatgggac
atgatgaggaaattcgacgacaacataccttctcgtgcattcgataatttccagtttgtg
aacttcacagagatcatgttaagacctataaataccagcaaaaaagaggcagaatttgct
ctttcagcactgatggagattccagcacagttcaaagcagcaatgaacctccagcttctt
ggaagacgaagaggattttcacatcaaccagtggtacctcctcctgtcagtgatcggcga
cagtactctggatgcaccgcagtcaaacagaccgaatctactagctatggatcagtacca
aaaactgcatcagcgcctcaacatgacagtgatgtaggtgatcaacagacttgtccaatc
tgctggagtcaagcaaagaaccttgcttttgggtgtgggcatcagacgtgctctgaatgc
gggaagaatctgaaggtttgccccctgtgccaaagggagatctccacaagaatcaagctt
tactga
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