Phragmites australis (common reed): 133899669
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Entry
133899669 CDS
T10575
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133899669
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
133899669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
DUF5996
Motif
Other DBs
NCBI-GeneID:
133899669
NCBI-ProteinID:
XP_062196681
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Position
18:3446866..3452911
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AA seq
635 aa
AA seq
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MASYRPYPPQQQHPPPPQGGFPPQMNPFAPPPPPPPQQQQQQTPYGRIPAPPYHAAAPPP
PPPGPPPPHQPQFNFGPRPPQQQPPPPPPQMYYQPPPPPYGGNSNPPPPPPSAPPPPPSP
PPSAPPPPPPLPVQPLPAQAPPPPKEQQPKASLPRAETDEERRARKKREFEKQRVEDRKQ
QQMMRQTQATILQKTQQVRAAQQPQSRHHQPPGVSRVAATGSRPASVPNVERFENRLKKP
TTFLCKHKFRNELPDPSAQLKWLPLNKDKDRYTKYRITSLEKNYMPKMIVPEDLGIPLDL
LDMSVYNPSPPSVQPPMAPEDEELLRDDEVLTPIKPEGIRKKGRPTDKGVSWLVKTQYIS
PLSTDAAKTSLTEKQAKERRESREGRNAFLDNLNDRDKQIKAIEESFRAAKALPVHQTKH
GMQLDWVMPLLPDFDRYEDPFVMVNFDGDPTADSEQYNKLERPVRNECESRAVMKSFSVN
GSDPTKQEKFLAYMAPSPHELARDLDDENDDIQYSWLREYHWEVRGDDKDDPTTYLVTFD
EEEGAKYLPLPTKLVLQKKKAKEGRSGDEIEHFPVPSQITVSRIARGGIMEHGESSGMHE
NLKRHRSPVDDDLDEHPKHSRVEDIDQYSGEEYSE
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtacaggccgtacccgccgcagcagcagcatccaccgccgccgcagggcggg
ttcccaccgcagatgaacccgttcgcaccgccgccgccgccgccgccgcagcagcagcag
cagcagacgccttacggccggataccggcgccgccgtaccacgcggcagcgcccccgccg
ccgccgcccggtccaccgcccccgcaccaaccgcagttcaacttcggccccaggcccccg
cagcagcagcctccgccgcctcccccgcagatgtactaccagcccccgccgccgccatac
ggcgggaacagcaacccgccgcctcctcccccttcagcgccgcctccaccgccgtcccct
cccccttcggcgccgcccccgcctccacccctgccggtgcagccactgcctgcccaggcc
ccaccacctccgaaggagcagcagcccaaggcctcgctgcccagagcggagacggatgag
gagcggcgcgcacggaagaagcgcgagtttgagaagcagcgggtggaggacaggaagcag
cagcagatgatgcgccagacccaggccaccattctgcagaaaacgcagcaggtgcgtgcc
gcgcagcagccacagagccgccaccaccagccaccgggtgtctcccgggtagcggcaact
gggtctcgcccagcctcagtgccgaatgttgagaggttcgagaatcggctcaaaaagcca
acaacgttcctctgcaagcacaagtttaggaatgaactgccagacccaagtgctcagctg
aaatggctgccactgaataaggataaggaccgatacactaaatacaggatcacttcattg
gagaaaaactacatgcctaaaatgattgtccctgaggatcttgggatacctcttgatcta
cttgatatgagtgtatacaaccctagccctccttctgttcagccacccatggctccagaa
gatgaagagctattgcgtgatgatgaggtcctcacccctattaaaccagaaggtataagg
aaaaaggggaggcccactgacaaaggtgtttcttggctggtcaaaacacaatacatatct
ccactcagtactgatgcagccaaaacgtcccttactgagaagcaagcgaaggaaaggcga
gaatcaagggagggtcgcaatgctttcttggacaatcttaatgatagagataaacagatc
aaagccatcgaagaatccttcagagcagctaaagcactgcctgttcatcagactaaacat
gggatgcaacttgactgggttatgcctttgctacctgatttcgacaggtacgaggatcca
tttgttatggtgaattttgatggagatcctactgctgattctgagcagtacaacaagcta
gagagacccgtacgtaatgaatgtgaatcccgggctgtgatgaaaagttttagtgtcaat
ggttcggatcctacaaaacaagagaaatttttggcatacatggccccatcaccgcatgag
cttgccagggacttggatgatgaaaatgatgatatccagtactcctggcttagagaatat
cattgggaagtaagaggagatgataaagatgatccaacaacataccttgtcacatttgat
gaggaggagggtgcaaaatatttgcctcttcctactaagctagttttgcagaagaagaaa
gcaaaagaggggaggtctggggatgaaattgagcattttccagtgccttctcaaattact
gtgagcaggatagctcgtggtggtatcatggaacatggagaatcttctggcatgcatgag
aatttaaagcgacatagatctcccgttgatgatgatcttgatgagcatccaaagcattct
cgggtagaagatattgaccaatatagcggagaagaatattctgagtga
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