Phragmites australis (common reed): 133899946
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Entry
133899946 CDS
T10575
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
paua Phragmites australis (common reed)
Pathway
paua03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133899946
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paua01002
]
133899946
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133899946
Enzymes [BR:
paua01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133899946
Peptidases and inhibitors [BR:
paua01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133899946
Ubiquitin system [BR:
paua04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133899946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
133899946
NCBI-ProteinID:
XP_062196976
LinkDB
All DBs
Position
19:complement(3418628..3434216)
Genome browser
AA seq
1117 aa
AA seq
DB search
MTPPTLEQEDVEMLVPHQELAASDADAAQAQPMEVVAQTEVASTAESQPAEDPQTSRFTW
TIENFTRFNGKKQYSEVFVVGGYKWRVLIFPKGNNVDHFSMYLDVADSANLPYGWSRYAQ
FSLAVVNQIQLKYTIHKDTQHQFNARESDWGFTSFMPLSDLYDPSKGFLVNDTVIVEAEV
AVRKMVDYWAYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPS
GSIPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKG
TVVEGTIEQLFEGHHINYIECINVDYKSSRKESFYDLQLDVKGCRDVYSSFDKYVEVERL
EGDNKYHAENHGLQDAKKGVLFLDFPPVLQLQLKRFEYDYMRDTMVKINDRYEFPLQLDL
DRDDGKYLAPDADRSTRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSEQWYKFDDERVTKE
DPKRALEEQYGGEEELPQINPGFNNTPFKFTKYSNAYMLVYIRESDKEKIMCTVDEKDIA
EHLRIRLKKEQEEKEHKKKEKAEAHLYTIIKVARDEDLKVQIGKDIYFDLVDHEKVCSFR
IQKQLPFSSFKEEVAKEYGIPVQFQRFWLWAKRQNHTYRPNRPLAPHEETQSVGQLREVS
NKAHNAELKLFLEVELGLDMRPLPREKSKEDILLFFKLYNPDKEELCFVGRLFVKALGKP
SEILAKLNEMAGFSPNEEIELYEEIKFEPNVMCEIIDKKLTFRSSQLEDGDIVCFQKSPR
ADYDTQVRYPDVPSFLEYVHNRQVVHFRSLEKPKDDDFSLELSKLHTYDDVVERVARQLG
LDDPTKIRLTSHNCYSQQPKPQPIKYRGVEHLLDMLIHYNQTSDILYYEVLDIALPELQF
LKTLKVAFHHATKDEVVIHSIRLPKNSTISDVINDLKTKVELSSPTAELRLLEVFYHKIY
KIFPLHEKIENINDQYWTLRAEEIPEEEKNIGPNDRLVHVYHFMKDPNQNQQIQNFGDPF
LLVIHEGETLTEVKKRIQSKLQVPDEEFSKWKFAFISMNRPDYLQDSDVVPACFQRRDVY
GAWEQYLGLEHTDTAPKRAYTVNQNRHTYEKPVRIYN
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgactcctcctactcttgagcaagaggacgtggagatgctcgtgccccaccaggagctc
gccgcatccgacgccgacgccgcccaggcccagcccatggaagtggtggcgcagacggag
gtggcgagcacagctgagagccagccagctgaagacccacagacgtcgcggttcacgtgg
acaattgagaacttcacccggttcaatgggaagaagcaatactccgaggtatttgtcgtt
ggcgggtacaaatggcgtgtgctgattttccccaaggggaacaatgtggaccacttctcg
atgtacttggacgttgctgactcagctaacctcccgtatggttggagccgctatgctcag
tttagcctggctgttgtaaaccagattcagctgaagtatacgatacacaaagatacccaa
catcaatttaatgctcgtgagagtgattggggtttcacatcttttatgcctttgagtgac
ctctatgatccaagcaaaggtttccttgtgaatgatactgttattgttgaggctgaggtt
gctgtccgcaaaatggttgactattgggcatatgactcaaaaaaggaaacaggttatgtc
ggtctgaaaaaccaaggagctacctgttacatgaactctcttctacaaacactgtaccac
ataccatacttcaggaaggctgtgtatcatatgccaaccactgaaaatgacatgccatct
ggaagtattcccttggcgctgcagagccttttctacaagctccagtatagtgacagcagt
gtagctacaaaagagttgaccaaatcttttggatgggacacttatgattctttcatgcag
catgatgtacaagagctcaacagagttctgtgtgagaaacttgaggacaagatgaaggga
actgttgtagaaggaacaattgagcaattatttgaaggtcaccacatcaattacattgag
tgtataaatgttgactataaatctagcaggaaggagtccttttatgaccttcaacttgat
gtcaaaggttgtcgcgacgtgtattcgtcgtttgataaatatgttgaagttgaacgtcta
gagggtgataacaagtatcacgcagaaaatcatggtttacaggatgcaaaaaagggcgtt
ctcttcctcgatttcccccctgttttgcaacttcagttgaagcgctttgagtatgattat
atgagagataccatggttaagattaatgatcgctatgagttccctctgcaactcgatctg
gatagagatgatggtaaataccttgctccagatgcagatcgaagtacaagaaacctttat
actcttcacagtgttctggttcatagtggtggggtacatggtggtcactactatgcattc
atacggccaactctatctgagcaatggtataaatttgatgatgagcgtgtaacaaaagaa
gatcctaagagggcccttgaagagcaatatgggggtgaagaagagttaccccaaataaac
cctggtttcaacaacaccccatttaaattcacaaagtattcaaacgcatatatgcttgtt
tatatccgtgagagtgacaaggagaaaataatgtgtactgttgatgagaaagacattgct
gagcatttaaggataaggttgaagaaagaacaagaagagaaagaacacaaaaagaaagaa
aaagctgaagctcatctctataccatcattaaggtagctcgagatgaggatttaaaggtg
caaattgggaaggatatatattttgacttggtggaccatgaaaaagtctgtagtttccga
atacagaagcaattgccatttagttctttcaaggaggaagttgccaaggaatatggtatc
ccagtgcagtttcagcgcttctggttgtgggcgaagaggcaaaaccatacataccgccct
aatcgtccattggcccctcatgaggaaacacaatctgtgggacagctgagggaggtatca
aataaggcacacaatgctgagctgaagctgtttttggaagtagaacttgggctggatatg
cgacctctccctcgtgagaagagcaaggaagatattcttcttttcttcaagctctacaac
ccagacaaggaagaactttgttttgtagggaggcttttcgtgaaggccttgggcaaacct
tcagaaatcctggcaaaactaaacgaaatggctggattttctccaaatgaagaaattgag
ctttatgaggaaattaagtttgagccaaatgtgatgtgtgaaattattgacaagaaactc
actttccgttctagtcagcttgaagatggggacattgtctgtttccaaaaatcaccaaga
gcagactatgatacacaagtgcgatatccagatgttccttcatttctggagtatgttcat
aataggcaggttgtgcacttccggtctttggagaaacccaaggatgatgatttttcgtta
gaattgtcaaagcttcatacctatgatgatgttgttgagagagttgctcggcagcttggt
ttggatgatccaacgaaaattcggcttacatcccataattgttactctcagcagcctaaa
ccacaacccatcaaatatcgaggagtggagcatctattggacatgctcatccattacaat
cagacgtctgacatcttgtattatgaagtgctggatattgcactgccagaactgcagttc
ttgaaaacccttaaagttgcattccaccatgctacaaaggacgaggttgtcattcatagc
atcagacttccaaagaatagcaccatttctgatgtaattaatgacttgaaaactaaggtt
gaattatccagccctactgctgaactacgcctgctagaagtcttttaccacaagatttat
aagatctttccgcttcacgagaagatagagaatataaatgatcaatactggacgctacgt
gctgaggagattccagaggaggagaaaaatatcggcccaaacgaccgcctagttcatgtt
tatcacttcatgaaagatcctaatcagaatcagcagatccagaactttggagacccattt
ttgcttgtgattcatgaaggtgagactttaacagaagtcaagaagcgcatacagagtaaa
ctacaagttcctgacgaggaattttccaagtggaaattcgcgttcatatctatgaatcgc
ccagattacctccaggattctgatgttgtacctgcctgttttcagaggagagatgtttat
ggagcttgggagcaatatcttgggttggaacacactgacactgcaccaaaaagggcctat
acagtgaatcagaaccgccacacatatgagaagccagtcagaatttacaattga
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integrated database retrieval system
