Phragmites australis (common reed): 133899960
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Entry
133899960 CDS
T10575
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00906
Carotenoid biosynthesis
paua01100
Metabolic pathways
paua01110
Biosynthesis of secondary metabolites
Module
paua_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
133899960
Enzymes [BR:
paua01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
133899960
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
HI0933_like
Thi4
GIDA
Pyr_redox_2
FAD_binding_3
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
133899960
NCBI-ProteinID:
XP_062196993
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Position
19:3311772..3316622
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AA seq
584 aa
AA seq
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MPPLAPARLHAPLLLAPVATPSRLRASTGPRGGSRRGGTAAAALASEKPPAVSVAGEERG
AGGDGRYDAIVIGSGIGGLVAATQLAAKGARVLVLEKYLIPGGSSGYYRRDGFTFDVGSS
VMFGFSDKGNLNLITQALEAVGHKMEVIPDPSTVHFHLPGDLSVLVHREYDDFIRELISK
FPHEKEGILQFYGTCWKIFNSLNSLELKSLEEPLYLFGQFFQKPLECLTLAYYLPQNAGD
IARKFIKDQQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHFGGINYPVGGVGGIATS
LADGLVDRGSKIRYKANVTNVIIENGKAVGARLSNGKEFFAKTVISNATRWDTFGKLLKD
EELPEEEKNFQKNYVKAPSFLSIHMGVKASVLPAGTDCHHFVLEDDWSNLEKPYGSIFLS
IPTVLDPSLAPEGHHILHIFTTAGIEDWEGLSRKEYEQKKELVANEIIRRLEKKLFPGLQ
DSIVLKEVGSPKTHRRFLARNDGTYGPMPRGKPKGLLAMPFNTTAIDGLYCVGDSCFPGQ
GVIAVAFSGIMCAHRVAADIGLEQRSPVLDAGLLGLLRWLRTLA
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgctcgcccccgcgcgcctccacgccccactcctcctggcccccgtcgccact
ccctcccgcctccgcgcctcgaccgggccccgcggcggcagcaggagaggtgggaccgcg
gccgcggcgctggcctcggagaagccgccggcggtgtctgtcgcgggcgaggagagaggg
gcggggggtgacgggcgctatgatgcgattgtgattgggtcggggatcgggggcctggtg
gcggcgacgcagctcgcggcgaagggggcgcgggtgctcgtgctcgagaagtacctcatc
ccggggggaagctccgggtactaccgccgcgacgggttcaccttcgacgttggctcctcc
gtcatgttcggattctccgacaagggaaacttgaatttgattacacaagcattagaagca
gttgggcataagatggaagtcatacctgacccttctacggttcatttccatctaccgggc
gatctctctgttcttgtgcatagggagtatgatgacttcatcagagaactgattagcaaa
tttcctcatgagaaggaagggatccttcaattctatggcacatgttggaagatcttcaat
tcattaaattcattggagctgaagtccctggaagagcctctttacctttttgggcaattt
tttcagaagcctctggaatgcttaactctagcttattatttgccacagaatgctggggat
attgctcgcaagttcattaaagatcagcagttactctccttcatagatgccgagtgtttt
attgtgagcacagtcaatgccttgcaaacacccatgatcaatgcaagcatggtcttgtgc
gataggcactttggggggattaattatccagttggtggcgttggtggtattgcgacatcc
ctggcagatggccttgttgacaggggcagcaaaatccgttacaaggcgaatgtgaccaat
gttattattgaaaacgggaaagctgttggggcgaggttatcgaatgggaaagagttcttt
gctaaaacagtgatatcaaatgccacaagatgggacacgtttggaaaactcttgaaagat
gaggagcttccagaagaggagaaaaacttccaaaagaattatgttaaggcaccatcattc
ctttctattcatatgggtgtcaaagcctcagttttgcctgctggtactgattgccaccat
tttgtacttgaggatgattggagtaatttggagaagccttatggaagcatatttttaagt
atccctacagttcttgatccatcattagctcccgaaggacatcatatacttcatatattt
acaaccgcaggcatagaagactgggagggtctttctaggaaggaatatgagcagaaaaag
gagcttgtcgccaatgagattataagaaggcttgaaaagaagttgtttcctggtcttcaa
gattcaatagtcctcaaggaggtaggctcaccaaaaactcaccgaagatttcttgctcga
aatgatggtacatatggaccaatgccacggggtaaaccgaagggcttactggcaatgcct
ttcaatactactgcgatagatggcctttactgcgttggtgacagctgttttcctgggcaa
ggtgtcattgctgtagcattttcagggatcatgtgtgctcaccgagttgctgcagatatt
ggacttgagcaaagatctcccgtgctagatgctggtcttcttgggctactcagatggctg
agaacactcgcatag
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